Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_F23
(884 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 1.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 1.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 24 1.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.4
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 23 2.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 4.2
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 7.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 9.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 9.7
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 58 AAPAPGHGLQPTMGDYTQLQPQRL 81
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 58 AAPAPGHGLQPTMGDYTQLQPQRL 81
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 58 AAPAPGHGLQPTMGDYTQLQPQRL 81
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 58 AAPAPGHGLQPTMGDYTQLQPQRL 81
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 58 AAPAPGHGLQPTMGDYTQLQPQRL 81
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 14 AAPAPGHGLQPTMGDYTQLQPQRL 37
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 58 AAPAPGHGLQPTMGDYTQLQPQRL 81
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 58 AAPAPGHGLQPTMGDYTQLQPQRL 81
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 787 AFPFPSHGSEPPSQTYPCLAPSRI 716
A P P HG +P Y L P R+
Sbjct: 58 AAPAPGHGLQPTMGDYTQLQPQRL 81
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 662 AMSRSSASDIDAELGPPVLSC 600
++ RSS+ A GPP++ C
Sbjct: 87 SLXRSSSPQTSAPTGPPIVRC 107
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 367 STRGTWWASRPSRSGTTTGXPLNKFTVR 450
+T WW + +R TTT T R
Sbjct: 1046 TTTSPWWTTTTTRRTTTTRPTTTSTTTR 1073
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 7.4
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +1
Query: 406 SGTTTGXPLNKFTVRDCQIMAVDKPRPYT-FTIRGLQ 513
SG TTG K + ++ D P P T F GL+
Sbjct: 130 SGITTGVNFMKLDEIEVKVTGNDAPPPITSFETSGLR 166
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -3
Query: 825 YNEVFLQYLHSVQLSRSLLTAQ 760
+NE+ QYLH ++ + ++A+
Sbjct: 1196 WNELIEQYLHPIEDDKKKVSAE 1217
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -3
Query: 825 YNEVFLQYLHSVQLSRSLLTAQ 760
+NE+ QYLH ++ + ++A+
Sbjct: 1196 WNELIEQYLHPIEDDKKKVSAE 1217
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,470
Number of Sequences: 336
Number of extensions: 4680
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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