Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F21
         (891 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7383 Cluster: PREDICTED: similar to CG32813-PA...    38   0.26 
UniRef50_Q28J92 Cluster: UPF0439 protein C9orf30 homolog; n=3; T...    35   3.2  
UniRef50_Q96H12 Cluster: UPF0439 protein C9orf30; n=11; Amniota|...    35   3.2  
UniRef50_UPI0000DA1C9E Cluster: PREDICTED: hypothetical protein;...    33   7.4  
UniRef50_Q0UDA4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_UPI0000E81107 Cluster: PREDICTED: hypothetical protein;...    33   9.8  
UniRef50_Q8RD80 Cluster: S-layer homology domain; n=1; Thermoana...    33   9.8  

>UniRef50_UPI0000DB7383 Cluster: PREDICTED: similar to CG32813-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG32813-PA, isoform A - Apis mellifera
          Length = 264

 Score = 38.3 bits (85), Expect = 0.26
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 166 RQLLLQLVAVHAXXXXXXXXXXXXXLKKKAWQNLANXFNSSIATVP-RTAAQLRLKWENL 342
           R++L+ L+  +               +K AW  LAN +NS +     R+A QLR  WEN+
Sbjct: 18  REILITLINKYEDIEDKRSDPISMYKRKSAWSQLANEYNSMVGPQGIRSAVQLRRCWENM 77

Query: 343 K 345
           K
Sbjct: 78  K 78


>UniRef50_Q28J92 Cluster: UPF0439 protein C9orf30 homolog; n=3;
           Tetrapoda|Rep: UPF0439 protein C9orf30 homolog - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis)
          Length = 365

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 241 LKKKAWQNLANXFNSSIATVPRTAAQLRLKWENLK 345
           LK++ WQ LA+ +NS  +   R   QL+  WEN+K
Sbjct: 44  LKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIK 78


>UniRef50_Q96H12 Cluster: UPF0439 protein C9orf30; n=11;
           Amniota|Rep: UPF0439 protein C9orf30 - Homo sapiens
           (Human)
          Length = 275

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 241 LKKKAWQNLANXFNSSIATVPRTAAQLRLKWENLK 345
           LK++ WQ LA+ +NS  +   R   QL+  WEN+K
Sbjct: 44  LKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIK 78


>UniRef50_UPI0000DA1C9E Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 656

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = +1

Query: 244 KKKAWQNLANXFNSSIATVPRTAAQLRLKWENLKKVCSQTLCQHEXTA------LLRTGR 405
           +K+ WQ L +     I + P+   Q  + W++L K   + L Q   TA      L RTGR
Sbjct: 302 RKEGWQTLPSAPKLKIISAPQARYQEVVSWDHLAKTYREKLAQQISTAIKDTEHLYRTGR 361

Query: 406 D 408
           D
Sbjct: 362 D 362


>UniRef50_Q0UDA4 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 1104

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 410 SSRPVLNKAVXSCWHSVCEQTFFKFSHLRRSCAAVRGT 297
           S  P++++AV  CWHS C++    + + +R      GT
Sbjct: 864 SEEPMIDQAVTGCWHSACKECLLNYINHQRDKNESSGT 901


>UniRef50_UPI0000E81107 Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 274

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 244 KKKAWQNLANXFNSSIATVPRTAAQLRLKWENL 342
           +++AW+ +A   N+    V RTA ++R KW N+
Sbjct: 43  RQRAWEEIAAAVNALSPVVRRTAEEIRKKWHNM 75


>UniRef50_Q8RD80 Cluster: S-layer homology domain; n=1;
           Thermoanaerobacter tengcongensis|Rep: S-layer homology
           domain - Thermoanaerobacter tengcongensis
          Length = 842

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +3

Query: 435 YWTK*LHFWASASHVKVVEVPAQICYYS-VTAYLQLSGNTRCRKSFAKLAYI 587
           Y+ K   F+A+A+ V V +VP +  YYS VT Y ++S N     S +++ Y+
Sbjct: 654 YYAKGYLFYATANSVTVGDVPWRGSYYSTVTGYYEISNNQWSFVSGSRVFYV 705


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,012,999
Number of Sequences: 1657284
Number of extensions: 10634979
Number of successful extensions: 22905
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22903
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)