Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F19
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310...    61   1e-09
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266...    57   2e-08

>01_01_0413 -
           3107668-3107796,3107879-3107971,3108082-3108253,
           3108341-3108417,3108514-3108673,3108766-3108875,
           3109384-3109443,3109545-3109618,3109748-3109871,
           3110795-3110872,3111169-3111275,3112572-3112673,
           3112800-3112815
          Length = 433

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 37/126 (29%), Positives = 60/126 (47%)
 Frame = +1

Query: 388 DPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNELGELGALGCTIK 567
           D + +D  L  +E+++R + RA   +++ P +        F      +L  LG  G TIK
Sbjct: 42  DYYQIDDLLTTEEQSIRKNVRAIMEKEIAPIMATYWEKAEFPFHAIPKLSSLGVAGGTIK 101

Query: 568 GYGCAGVSYVTYGLITRELDGVDSSYRSAMSVQSXLAMGSIYMYGTEDXXQXXFHAWLQV 747
           GYGC G+S     +   E+  VD+S  + + V S LAM +I + G+E   Q    +  Q+
Sbjct: 102 GYGCPGLSITASAITMAEIARVDASCSTFILVHSSLAMVTIALCGSEVQKQKYLPSLAQL 161

Query: 748 N*XVVW 765
                W
Sbjct: 162 TAVGCW 167


>06_02_0283 +
           13726047-13726090,13726160-13726266,13726515-13726621,
           13726735-13726812,13734948-13735071,13735585-13735658,
           13735742-13735801,13737561-13737670,13737806-13737965,
           13738218-13738360,13738461-13738605,13738727-13738819,
           13740070-13740186
          Length = 453

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 35/103 (33%), Positives = 52/103 (50%)
 Frame = +1

Query: 400 LDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNELGELGALGCTIKGYGC 579
           LD  L ++EK ++   R +   ++ P + +      F   +  ++  LG  G TIKGYGC
Sbjct: 57  LDELLTEEEKDLQIKVRQFMENEVAPIISKFWEKAEFPFHLIPKMSTLGIAGGTIKGYGC 116

Query: 580 AGVSYVTYGLITRELDGVDSSYRSAMSVQSXLAMGSIYMYGTE 708
            G+S     +   E+  VD+S  S   VQS LAM SI   G+E
Sbjct: 117 PGLSGPACAMCFLEIARVDASIASFCLVQSCLAMVSIAQLGSE 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,086,833
Number of Sequences: 37544
Number of extensions: 321566
Number of successful extensions: 568
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)