Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F19
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.7  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    24   5.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 635 STPSSSLVMRPYVT*ETPAHP*PLMVQPRAPNSPSS 528
           +TP+S+    PY T    A   PL +  +AP  P S
Sbjct: 769 NTPNSAAAPHPYYTAAAMAAASPLSLSSKAPPHPHS 804


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 15/72 (20%), Positives = 31/72 (43%)
 Frame = +1

Query: 427 KAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNELGELGALGCTIKGYGCAGVSYVTYG 606
           K   +SF AYC +K L    +    ++   E+ +      A+ C  +G+     S +   
Sbjct: 168 KKQEESFFAYCAKKALGANGKEGYKKIRDYELADSAEFRNAMDCVFRGFRYMDDSGLKVD 227

Query: 607 LITRELDGVDSS 642
            + R+ + ++ S
Sbjct: 228 EVVRDFNLINKS 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,887
Number of Sequences: 2352
Number of extensions: 13372
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)