Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F19
         (857 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U69141-1|AAB08455.1|  438|Homo sapiens glutaryl-CoA dehydrogenas...   166   1e-40
BT006706-1|AAP35352.1|  438|Homo sapiens glutaryl-Coenzyme A deh...   166   1e-40
BC002579-1|AAH02579.1|  438|Homo sapiens glutaryl-Coenzyme A deh...   166   1e-40
AF012342-1|AAC52079.1|  438|Homo sapiens glutaryl-CoA dehydrogen...   166   1e-40
AD000092-4|AAB51174.1|  438|Homo sapiens glutaryl Co-A dehydroge...   166   1e-40

>U69141-1|AAB08455.1|  438|Homo sapiens glutaryl-CoA dehydrogenase
           protein.
          Length = 438

 Score =  166 bits (403), Expect = 1e-40
 Identities = 76/122 (62%), Positives = 94/122 (77%)
 Frame = +1

Query: 355 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 534
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 535 GELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSSYRSAMSVQSXLAMGSIYMYGTEDX 714
           GELG LG TIKGYGCAGVS V YGL+ REL+ VDS YRSAMSVQS L M  IY YG+E+ 
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQ 160

Query: 715 XQ 720
            Q
Sbjct: 161 RQ 162


>BT006706-1|AAP35352.1|  438|Homo sapiens glutaryl-Coenzyme A
           dehydrogenase protein.
          Length = 438

 Score =  166 bits (403), Expect = 1e-40
 Identities = 76/122 (62%), Positives = 94/122 (77%)
 Frame = +1

Query: 355 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 534
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 535 GELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSSYRSAMSVQSXLAMGSIYMYGTEDX 714
           GELG LG TIKGYGCAGVS V YGL+ REL+ VDS YRSAMSVQS L M  IY YG+E+ 
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQ 160

Query: 715 XQ 720
            Q
Sbjct: 161 RQ 162


>BC002579-1|AAH02579.1|  438|Homo sapiens glutaryl-Coenzyme A
           dehydrogenase protein.
          Length = 438

 Score =  166 bits (403), Expect = 1e-40
 Identities = 76/122 (62%), Positives = 94/122 (77%)
 Frame = +1

Query: 355 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 534
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 535 GELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSSYRSAMSVQSXLAMGSIYMYGTEDX 714
           GELG LG TIKGYGCAGVS V YGL+ REL+ VDS YRSAMSVQS L M  IY YG+E+ 
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQ 160

Query: 715 XQ 720
            Q
Sbjct: 161 RQ 162


>AF012342-1|AAC52079.1|  438|Homo sapiens glutaryl-CoA dehydrogenase
           protein.
          Length = 438

 Score =  166 bits (403), Expect = 1e-40
 Identities = 76/122 (62%), Positives = 94/122 (77%)
 Frame = +1

Query: 355 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 534
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 535 GELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSSYRSAMSVQSXLAMGSIYMYGTEDX 714
           GELG LG TIKGYGCAGVS V YGL+ REL+ VDS YRSAMSVQS L M  IY YG+E+ 
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQ 160

Query: 715 XQ 720
            Q
Sbjct: 161 RQ 162


>AD000092-4|AAB51174.1|  438|Homo sapiens glutaryl Co-A
           dehydrogenase protein.
          Length = 438

 Score =  166 bits (403), Expect = 1e-40
 Identities = 76/122 (62%), Positives = 94/122 (77%)
 Frame = +1

Query: 355 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 534
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 535 GELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSSYRSAMSVQSXLAMGSIYMYGTEDX 714
           GELG LG TIKGYGCAGVS V YGL+ REL+ VDS YRSAMSVQS L M  IY YG+E+ 
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQ 160

Query: 715 XQ 720
            Q
Sbjct: 161 RQ 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,991,831
Number of Sequences: 237096
Number of extensions: 1870895
Number of successful extensions: 7156
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7156
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)