Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F18
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   3.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 43  IVSNGHWAPLVSSMYTPIEYN 105
           ++SNG+ +P+ S  Y P   N
Sbjct: 130 VISNGYSSPMSSGSYDPYSPN 150


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 91  PIEYNMLFFFIQYCCTYYVPY 153
           P E   + FF  +CC  +  Y
Sbjct: 3   PGELKRVLFFFSFCCILFFIY 23


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 620 PYPVCSGCIGQNRICK 667
           PY V  G +G N IC+
Sbjct: 284 PYTVNLGSLGYNEICE 299


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 20  HHYRESLRLYQTVIGH 67
           HH  + +RL+  + GH
Sbjct: 859 HHLSKLIRLFNEIFGH 874


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,442
Number of Sequences: 336
Number of extensions: 4698
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)