Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F17
         (942 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.010
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.27 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.82 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   1.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.7  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   7.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   7.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   7.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   7.7  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   7.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.15
 Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
 Frame = -3

Query: 727 PFFFLGXGXGPXXKNFXLGXPRXXGGXXPPPXGGGXXPPPPXTXPXGFXXGGG-GGGGXX 551
           PFF L     P    F  G P       PP       PPPP   P     GG  GG    
Sbjct: 558 PFFPLN----PAQLRFPAGFPNLPNAQPPP----APPPPPPMGPPPSPLAGGPLGGPAGS 609

Query: 550 XPPXP--XGGGG 521
            PP P   G GG
Sbjct: 610 RPPLPNLLGFGG 621



 Score = 28.7 bits (61), Expect(2) = 0.010
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
 Frame = +3

Query: 558 PPPP--PPPXKXPXGXVXGGGGXXPPPXG----GGXXPP 656
           PPPP  PPP     G + G  G  PP       GG  PP
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 27.5 bits (58), Expect = 0.62
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 543 GGXXXPPPPPPP 578
           GG   PPPPPPP
Sbjct: 525 GGPLGPPPPPPP 536



 Score = 27.1 bits (57), Expect = 0.82
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +3

Query: 561 PPPPPPXKXPXGXVXGGGGXXPPPXGG--GXXPP 656
           PPPPPP   P   + GG      P GG  G  PP
Sbjct: 585 PPPPPPMGPPPSPLAGG------PLGGPAGSRPP 612



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 544 GXXXXPPPPPPP 579
           G    PPPPPPP
Sbjct: 525 GGPLGPPPPPPP 536



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = -2

Query: 665 PXXGGXXPPPXGGXXPPPPPXHXAXGXFXGGGGGGGXXXXP 543
           P      PPP     PPPPP         GG  GG     P
Sbjct: 574 PNLPNAQPPPA---PPPPPPMGPPPSPLAGGPLGGPAGSRP 611



 Score = 23.4 bits (48), Expect(2) = 0.010
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
 Frame = +3

Query: 522 PPPPXGXGGXXXPPPP---PPP 578
           PPPP   GG     PP   PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.27
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 571 GGGGGXXXPPXPXGGGG 521
           GGGGG    P P GGGG
Sbjct: 213 GGGGGSSGGPGPGGGGG 229



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 589 GFXXGGGGGGGXXXPPXPXGGGG 521
           G   GGGG  G   P    GGGG
Sbjct: 210 GAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 589 GFXXGGGGGGGXXXPPXPXGGGG 521
           G   GGGGG      P   GGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGG 231


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.82
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 537 GXGGXXXPPPPPPPXKXPXG 596
           G G    PPPPPP    P G
Sbjct: 779 GIGSPPPPPPPPPSSLSPGG 798



 Score = 27.1 bits (57), Expect = 0.82
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 546 GXXXPPPPPPPXKXPXGXV 602
           G   PPPPPPP     G V
Sbjct: 781 GSPPPPPPPPPSSLSPGGV 799


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 602 HXAXGXFXGGGGGGG 558
           H   G   GGGGGGG
Sbjct: 289 HQHGGGVGGGGGGGG 303



 Score = 22.6 bits (46), Expect(2) = 1.4
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 577 GGGGGGGXXXPPXPXGGGG 521
           GGGGGGG        GG G
Sbjct: 654 GGGGGGGGGGGSVGSGGIG 672



 Score = 21.8 bits (44), Expect(2) = 1.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 589 GFXXGGGGGGG 557
           G   GGGGGGG
Sbjct: 651 GSGGGGGGGGG 661


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = -3

Query: 613 PPPXTXPXGFXXGGGGGGGXXXPPXPXGGGGFFXXKKXXPPPP 485
           P     P G   GGGGGGG        GGGG          PP
Sbjct: 537 PNGPVGPAGVGGGGGGGGG-------GGGGGVIGSGSTTRLPP 572


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -3

Query: 643 PPPXGGGXXPPPPXTXPXGFXXGGGGGGGXXXPPXPXGGGG 521
           PPP G    P P      G   GG   G       P GGGG
Sbjct: 495 PPPGGRPNAPNPSSAVTPG---GGRAEGDKVTFQIPNGGGG 532



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 669 PPGXXGGXTPPXXGXEXXPPPPXP 598
           PPG  G   PP  G    P PP P
Sbjct: 194 PPGNVG---PPRTGTPTQPQPPRP 214


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 602 HXAXGXFXGGGGGGG 558
           H   G   GGGGGGG
Sbjct: 289 HQHGGGVGGGGGGGG 303


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 602 HXAXGXFXGGGGGGG 558
           H   G   GGGGGGG
Sbjct: 241 HQHGGGVGGGGGGGG 255


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 577 GGGGGGGXXXPPXPXGGG 524
           GGGGGGG        GGG
Sbjct: 553 GGGGGGGGGGGGGGVGGG 570


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -3

Query: 652 GXXPPPXGGGXXPPPPXTXPXGFXXGGGGGGGXXXPPXPXGGGG 521
           G    P   G    P    P G   GG G  G   P  P G  G
Sbjct: 380 GPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEG 423


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 577 GGGGGGGXXXPPXPXGGG 524
           GGGGGGG        GGG
Sbjct: 554 GGGGGGGGGGGGGGVGGG 571


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 640 PPXGGGXXPPPPXTXPXGFXXGGGGGGGXXXP 545
           P  G G   P   +   G   GG GGGG   P
Sbjct: 375 PVNGYGNNHPTGGSNLPGNNNGGAGGGGSNTP 406


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,942
Number of Sequences: 2352
Number of extensions: 13884
Number of successful extensions: 357
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)