Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F15
         (1109 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U78971-1|AAB47504.1|  404|Homo sapiens Sam68deltaKH protein.           31   5.7  
M88108-1|AAA59990.1|  443|Homo sapiens p62 protein.                    31   5.7  
BC019109-1|AAH19109.1|  443|Homo sapiens KH domain containing, R...    31   5.7  
BC010132-1|AAH10132.1|  381|Homo sapiens KHDRBS1 protein protein.      31   5.7  
BC000717-1|AAH00717.1|  443|Homo sapiens KH domain containing, R...    31   5.7  
AL445248-2|CAH71945.1|  443|Homo sapiens KH domain containing, R...    31   5.7  
AL445248-1|CAH71944.1|  404|Homo sapiens KH domain containing, R...    31   5.7  
AL139249-2|CAI21972.1|  443|Homo sapiens KH domain containing, R...    31   5.7  
AL139249-1|CAI21971.1|  404|Homo sapiens KH domain containing, R...    31   5.7  
AK091346-1|BAC03643.1|  418|Homo sapiens protein ( Homo sapiens ...    31   5.7  

>U78971-1|AAB47504.1|  404|Homo sapiens Sam68deltaKH protein.
          Length = 404

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 257 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 315

Query: 796 XPFXXP 813
            P   P
Sbjct: 316 IPLPPP 321


>M88108-1|AAA59990.1|  443|Homo sapiens p62 protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 296 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 354

Query: 796 XPFXXP 813
            P   P
Sbjct: 355 IPLPPP 360


>BC019109-1|AAH19109.1|  443|Homo sapiens KH domain containing, RNA
           binding, signal transduction associated 1 protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 296 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 354

Query: 796 XPFXXP 813
            P   P
Sbjct: 355 IPLPPP 360


>BC010132-1|AAH10132.1|  381|Homo sapiens KHDRBS1 protein protein.
          Length = 381

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 296 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 354

Query: 796 XPFXXP 813
            P   P
Sbjct: 355 IPLPPP 360


>BC000717-1|AAH00717.1|  443|Homo sapiens KH domain containing, RNA
           binding, signal transduction associated 1 protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 296 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 354

Query: 796 XPFXXP 813
            P   P
Sbjct: 355 IPLPPP 360


>AL445248-2|CAH71945.1|  443|Homo sapiens KH domain containing, RNA
           binding, signal transduction associated 1 protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 296 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 354

Query: 796 XPFXXP 813
            P   P
Sbjct: 355 IPLPPP 360


>AL445248-1|CAH71944.1|  404|Homo sapiens KH domain containing, RNA
           binding, signal transduction associated 1 protein.
          Length = 404

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 257 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 315

Query: 796 XPFXXP 813
            P   P
Sbjct: 316 IPLPPP 321


>AL139249-2|CAI21972.1|  443|Homo sapiens KH domain containing, RNA
           binding, signal transduction associated 1 protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 296 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 354

Query: 796 XPFXXP 813
            P   P
Sbjct: 355 IPLPPP 360


>AL139249-1|CAI21971.1|  404|Homo sapiens KH domain containing, RNA
           binding, signal transduction associated 1 protein.
          Length = 404

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 257 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 315

Query: 796 XPFXXP 813
            P   P
Sbjct: 316 IPLPPP 321


>AK091346-1|BAC03643.1|  418|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34027 fis, clone FCBBF2003549, highly similar to
           GAP-associated tyrosine phosphoprotein p62 (Sam68). ).
          Length = 418

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +1

Query: 616 PXPAXPXXXXTGPPRGXCXXXAXLRPAPXGXPEVXLXXPPRPLLXXXXAPGNRLXXGFHH 795
           P P  P     GPPRG       +R A      V    PP P +    AP  R   G   
Sbjct: 271 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRAR-TAGIQR 329

Query: 796 XPFXXP 813
            P   P
Sbjct: 330 IPLPPP 335


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,653,872
Number of Sequences: 237096
Number of extensions: 1639164
Number of successful extensions: 1879
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15368764628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)