Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F15
         (1109 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.    43   7e-04
U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.    43   7e-04
U08217-1|AAA19856.1|  148|Drosophila melanogaster protein ( Dros...    43   7e-04
AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA...    43   7e-04

>U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score = 43.2 bits (97), Expect = 7e-04
 Identities = 21/35 (60%), Positives = 23/35 (65%)
 Frame = +2

Query: 269 KQIDVXTVGERNAXYKQXLEDLXKGXTXEXRXGLF 373
           KQIDV TV +RNA Y Q LED+ K    E R GLF
Sbjct: 35  KQIDVETVADRNAEYDQFLEDIQKCGPGECRYGLF 69


>U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score = 43.2 bits (97), Expect = 7e-04
 Identities = 21/35 (60%), Positives = 23/35 (65%)
 Frame = +2

Query: 269 KQIDVXTVGERNAXYKQXLEDLXKGXTXEXRXGLF 373
           KQIDV TV +RNA Y Q LED+ K    E R GLF
Sbjct: 35  KQIDVETVADRNAEYDQFLEDIQKCGPGECRYGLF 69


>U08217-1|AAA19856.1|  148|Drosophila melanogaster protein (
           Drosophila melanogastercofilin/actin depolymerizing
           factor homolog mRNA, completecds. ).
          Length = 148

 Score = 43.2 bits (97), Expect = 7e-04
 Identities = 21/35 (60%), Positives = 23/35 (65%)
 Frame = +2

Query: 269 KQIDVXTVGERNAXYKQXLEDLXKGXTXEXRXGLF 373
           KQIDV TV +RNA Y Q LED+ K    E R GLF
Sbjct: 35  KQIDVETVADRNAEYDQFLEDIQKCGPGECRYGLF 69


>AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA
           protein.
          Length = 148

 Score = 43.2 bits (97), Expect = 7e-04
 Identities = 21/35 (60%), Positives = 23/35 (65%)
 Frame = +2

Query: 269 KQIDVXTVGERNAXYKQXLEDLXKGXTXEXRXGLF 373
           KQIDV TV +RNA Y Q LED+ K    E R GLF
Sbjct: 35  KQIDVETVADRNAEYDQFLEDIQKCGPGECRYGLF 69


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,450,841
Number of Sequences: 53049
Number of extensions: 422847
Number of successful extensions: 468
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5780601582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)