Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F13
         (893 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.8  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   4.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   4.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.2  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = +3

Query: 360 AXPFFXXFXGGGGGGXGXXXXXXN--PXKXGGXXGGXF 467
           A P++    GGGGGG G         P + G   GG +
Sbjct: 116 ANPYYGATAGGGGGGYGHQGSMMRAMPPELGMYGGGCY 153


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 890 PXRPGGGXXGGGXGXPXGV*KXGKT 816
           P   GGG  GGG G   GV   G T
Sbjct: 543 PAGVGGGGGGGGGGGGGGVIGSGST 567


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 878 GGGXXGGGXGXPXGV 834
           GGG  GGG G P G+
Sbjct: 15  GGGGGGGGGGGPSGM 29



 Score = 21.0 bits (42), Expect(2) = 6.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 360 AXPFFXXFXGGGGGGXG 410
           A P      GGGGGG G
Sbjct: 8   ASPLRAGGGGGGGGGGG 24



 Score = 21.0 bits (42), Expect(2) = 6.0
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 387 GGGGGGXGXXXXXXNPXKXG 446
           GGGGGG G      N    G
Sbjct: 18  GGGGGGGGPSGMYDNISNDG 37


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 823 PXFXTPWGXPXPPPXXPPP 879
           P    P   P PPP  PPP
Sbjct: 577 PNAQPPPAPPPPPPMGPPP 595



 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -3

Query: 411 PXNPPPPPPXXXKKKXGPXXF*P 343
           P  PPPPPP        P  F P
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLP 549



 Score = 23.4 bits (48), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 844 GXPXPPPXXPPPG 882
           G P  PP  PPPG
Sbjct: 525 GGPLGPPPPPPPG 537


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -1

Query: 890 PXRPGGGXXGGGXGXPXGV*KXGKTRQGXRG 798
           P   GGG  GGG G   G    G +  G  G
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGIGSSSLGGGG 680


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 387 GGGGGGXGXXXXXXNPXKXGGXXGG 461
           GGGGGG        +  + GG  GG
Sbjct: 227 GGGGGGRDRDHRDRDREREGGGNGG 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.148    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,007
Number of Sequences: 2352
Number of extensions: 4960
Number of successful extensions: 58
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)