Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F13
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          27   1.9  
U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    27   2.0  
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    27   2.0  
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    27   2.0  
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    27   2.0  

>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 27.5 bits (58), Expect(2) = 1.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 462 GPXXXPXFXGGXXXFXXPXNPPPPPP 385
           GP   P    G      P  PPPPPP
Sbjct: 391 GPLPPPPPGAGGPPMPPPPPPPPPPP 416



 Score = 23.8 bits (49), Expect(2) = 1.9
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 402 PPPPPPXXXKKKXGP 358
           PPPPPP       GP
Sbjct: 408 PPPPPPPPPSSGNGP 422


>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 27.5 bits (58), Expect(2) = 2.0
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 462 GPXXXPXFXGGXXXFXXPXNPPPPPP 385
           GP   P    G      P  PPPPPP
Sbjct: 379 GPLPPPPPGAGGPPMPPPPPPPPPPP 404



 Score = 23.8 bits (49), Expect(2) = 2.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 402 PPPPPPXXXKKKXGP 358
           PPPPPP       GP
Sbjct: 396 PPPPPPPPPSSGNGP 410


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 27.5 bits (58), Expect(2) = 2.0
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 462 GPXXXPXFXGGXXXFXXPXNPPPPPP 385
           GP   P    G      P  PPPPPP
Sbjct: 379 GPLPPPPPGAGGPPMPPPPPPPPPPP 404



 Score = 23.8 bits (49), Expect(2) = 2.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 402 PPPPPPXXXKKKXGP 358
           PPPPPP       GP
Sbjct: 396 PPPPPPPPPSSGNGP 410


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 27.5 bits (58), Expect(2) = 2.0
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 462 GPXXXPXFXGGXXXFXXPXNPPPPPP 385
           GP   P    G      P  PPPPPP
Sbjct: 379 GPLPPPPPGAGGPPMPPPPPPPPPPP 404



 Score = 23.8 bits (49), Expect(2) = 2.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 402 PPPPPPXXXKKKXGP 358
           PPPPPP       GP
Sbjct: 396 PPPPPPPPPSSGNGP 410


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 27.5 bits (58), Expect(2) = 2.0
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 462 GPXXXPXFXGGXXXFXXPXNPPPPPP 385
           GP   P    G      P  PPPPPP
Sbjct: 379 GPLPPPPPGAGGPPMPPPPPPPPPPP 404



 Score = 23.8 bits (49), Expect(2) = 2.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 402 PPPPPPXXXKKKXGP 358
           PPPPPP       GP
Sbjct: 396 PPPPPPPPPSSGNGP 410


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.315    0.148    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,855,984
Number of Sequences: 237096
Number of extensions: 1075794
Number of successful extensions: 12454
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10334
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)