Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F13
         (893 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3317|AAF49038.2| 1350|Drosophila melanogaster CG32226-P...    30   4.9  
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    24   9.8  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    24   9.8  

>AE014296-3317|AAF49038.2| 1350|Drosophila melanogaster CG32226-PA
            protein.
          Length = 1350

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 703  GNWGGXFLKGXXGGGK 656
            G WGG FLKG  G GK
Sbjct: 1000 GGWGGMFLKGLEGSGK 1015


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 23.8 bits (49), Expect(2) = 9.8
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 459 PXXXPXFXGGXXXFXXPXNPPPPPP 385
           P   P    G      P  PPPPPP
Sbjct: 219 PGTGPPGPPGPPGTTYPQPPPPPPP 243



 Score = 23.4 bits (48), Expect(2) = 9.8
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -3

Query: 411 PXNPPPPPPXXXKKKXGPXXF*P 343
           P  PPPPPP        P  + P
Sbjct: 238 PPPPPPPPPPPPSYPYPPYPYPP 260


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 23.8 bits (49), Expect(2) = 9.8
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 459 PXXXPXFXGGXXXFXXPXNPPPPPP 385
           P   P    G      P  PPPPPP
Sbjct: 221 PGTGPPGPPGPPGTTYPQPPPPPPP 245



 Score = 23.4 bits (48), Expect(2) = 9.8
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -3

Query: 411 PXNPPPPPPXXXKKKXGPXXF*P 343
           P  PPPPPP        P  + P
Sbjct: 240 PPPPPPPPPPPPSYPYPPYPYPP 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.315    0.148    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,273,080
Number of Sequences: 53049
Number of extensions: 330895
Number of successful extensions: 5411
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4712
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)