Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F11
         (957 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U01239-1|AAC46466.1|  575|Drosophila melanogaster glutamate deca...    47   4e-05
AY069752-1|AAL39897.1|  575|Drosophila melanogaster LP11089p pro...    47   4e-05
AE014134-2405|AAF53337.1|  575|Drosophila melanogaster CG7811-PA...    47   4e-05

>U01239-1|AAC46466.1|  575|Drosophila melanogaster glutamate
           decarboxylase protein.
          Length = 575

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
 Frame = +1

Query: 442 TXAFNTXQYTFEVXPIXXLIXLXVXNHILXXSGIP---XGDXIXSPVGXVSXXXXXXXXX 612
           T A N   YT+EV P+  L+   V   +    G P    GD I  P G ++         
Sbjct: 187 TDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPNGGQGDGIFCPGGSIANGYAISCAR 246

Query: 613 XXXFPXFDTKXITXLPXIXIXSXEDXHYSXKKXXHXLRFRTKSLPXIXXNEXWQXXVXEL 792
               P      +     + I + ED HYS +K    + F +  +  I  NE  +  + +L
Sbjct: 247 YRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDL 306

Query: 793 XXAIXXXXXXAYFXLXXXAXDXTXVLGA 876
              +       +  L   A   T VLGA
Sbjct: 307 EKQVKLCLENGWQPLMVSATAGTTVLGA 334


>AY069752-1|AAL39897.1|  575|Drosophila melanogaster LP11089p
           protein.
          Length = 575

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
 Frame = +1

Query: 442 TXAFNTXQYTFEVXPIXXLIXLXVXNHILXXSGIP---XGDXIXSPVGXVSXXXXXXXXX 612
           T A N   YT+EV P+  L+   V   +    G P    GD I  P G ++         
Sbjct: 187 TDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPNGGQGDGIFCPGGSIANGYAISCAR 246

Query: 613 XXXFPXFDTKXITXLPXIXIXSXEDXHYSXKKXXHXLRFRTKSLPXIXXNEXWQXXVXEL 792
               P      +     + I + ED HYS +K    + F +  +  I  NE  +  + +L
Sbjct: 247 YRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDL 306

Query: 793 XXAIXXXXXXAYFXLXXXAXDXTXVLGA 876
              +       +  L   A   T VLGA
Sbjct: 307 EKQVKLCLENGWQPLMVSATAGTTVLGA 334


>AE014134-2405|AAF53337.1|  575|Drosophila melanogaster CG7811-PA
           protein.
          Length = 575

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
 Frame = +1

Query: 442 TXAFNTXQYTFEVXPIXXLIXLXVXNHILXXSGIP---XGDXIXSPVGXVSXXXXXXXXX 612
           T A N   YT+EV P+  L+   V   +    G P    GD I  P G ++         
Sbjct: 187 TDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPNGGQGDGIFCPGGSIANGYAISCAR 246

Query: 613 XXXFPXFDTKXITXLPXIXIXSXEDXHYSXKKXXHXLRFRTKSLPXIXXNEXWQXXVXEL 792
               P      +     + I + ED HYS +K    + F +  +  I  NE  +  + +L
Sbjct: 247 YRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDL 306

Query: 793 XXAIXXXXXXAYFXLXXXAXDXTXVLGA 876
              +       +  L   A   T VLGA
Sbjct: 307 EKQVKLCLENGWQPLMVSATAGTTVLGA 334


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,868,637
Number of Sequences: 53049
Number of extensions: 111698
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)