Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F08
         (885 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    62   3e-11
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   5.4  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 61.7 bits (143), Expect = 3e-11
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +3

Query: 147 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF-PRAVFLKVDVDRC 323
           ++++   F  ++  AG +LVVVDF ATWC PC+ IAP  E+   K+  + V +KVDVD C
Sbjct: 4   MVKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDEC 63

Query: 324 ADTAS 338
            + A+
Sbjct: 64  EELAA 68



 Score = 32.7 bits (71), Expect = 0.015
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 349 VSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQY 450
           +++MPTF+F + +  + +  G N   LEN ++Q+
Sbjct: 72  IASMPTFLFIKRKEVVGQFSGANAEKLENFIQQH 105


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 511 ITFITKSECECLNEADDHPLAQALTNDRGYLAG 609
           +TF+ +   E L E D      ALT+D G+  G
Sbjct: 299 VTFVDELIGELLQEVDISRTIVALTSDHGWALG 331


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,984
Number of Sequences: 2352
Number of extensions: 13199
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)