Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F07
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570           30   2.3  
03_05_0067 - 20460206-20460703,20461255-20461530                       30   3.0  
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794...    29   3.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.2  
01_01_0083 + 631196-631675                                             29   5.2  
01_06_1682 - 39130696-39131705,39132355-39132583                       29   6.9  

>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
          Length = 378

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = -3

Query: 907 PPPPPXPXKKKXGXAXXXKXGGGGKSXXKXXPXXFXGXP 791
           PPPPP P  K    A     GGGG S          G P
Sbjct: 171 PPPPPPPASKSDHPAPLYGEGGGGFSWDAADSPAAGGLP 209


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 766 PPPPXKXXXGPPXXXXGXFFXXFSPPPPXFXXGPXP 873
           PPPP +   GPP      F     PPPP +  G  P
Sbjct: 4   PPPPPQWAMGPPPPPQ-YFQAGPPPPPPQYFQGAHP 38


>11_02_0065 -
           7938007-7938393,7939292-7939435,7940597-7940665,
           7940762-7940809,7941488-7941584,7941688-7941767,
           7941841-7941912,7942256-7942350,7943903-7943984,
           7945176-7945209,7945255-7945262,7945657-7946058
          Length = 505

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = +1

Query: 766 PPPPX--KXXXGPPXXXXGXFFXXFSPPPPXFXXGPXPLFFXXXGGGGG 906
           PPPP   +     P      FF    PPPP     P   ++   GGGGG
Sbjct: 54  PPPPQVIRVFAAAPPPPPAAFFAAVPPPPP-----PPFEYYPAVGGGGG 97


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 919 KXXXPPPPPXPXKKKXGXAXXXKXGGGGK 833
           K   PPPPP P  KK G       GG  +
Sbjct: 360 KGPSPPPPPPPGGKKGGPPPPPPKGGASR 388



 Score = 28.7 bits (61), Expect = 6.9
 Identities = 17/48 (35%), Positives = 17/48 (35%)
 Frame = +1

Query: 766 PPPPXKXXXGPPXXXXGXFFXXFSPPPPXFXXGPXPLFFXXXGGGGGG 909
           PPPP      PP            PPPP    GP P      GG  GG
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376


>01_01_0083 + 631196-631675
          Length = 159

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/51 (33%), Positives = 19/51 (37%)
 Frame = +1

Query: 766 PPPPXKXXXGPPXXXXGXFFXXFSPPPPXFXXGPXPLFFXXXGGGGGGXXF 918
           PPP       PP       +    PPP     G  P +    GGGGGG  F
Sbjct: 58  PPPSSSSSNTPPSSSSYWNY----PPPQGGGGGYIPYYQPPAGGGGGGGGF 104


>01_06_1682 - 39130696-39131705,39132355-39132583
          Length = 412

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +1

Query: 766 PPPPXKXXXGPPXXXXGXFFXXFSPPPPXFXXGP 867
           PPPP K    PP          +SPPP  F   P
Sbjct: 308 PPPPYKSPPIPPYYFNSPPANHYSPPPYNFGSSP 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,810,400
Number of Sequences: 37544
Number of extensions: 419940
Number of successful extensions: 5218
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4241
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)