Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_F06
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 33 1.1
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 33 1.1
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 33 1.1
M95586-1|AAA58445.1| 574|Homo sapiens E2A/HLF fusion protein pr... 32 3.2
M31523-1|AAA61146.1| 654|Homo sapiens TCF3 protein. 32 3.2
M31222-1|AAA52331.1| 648|Homo sapiens TCF3 protein. 32 3.2
BC110579-1|AAI10580.1| 651|Homo sapiens TCF3 protein protein. 32 3.2
BC075798-1|AAH75798.1| 1222|Homo sapiens GPR126 protein protein. 32 3.2
AY181244-1|AAO27356.1| 541|Homo sapiens G protein-coupled recep... 32 3.2
AF216967-1|AAO13250.1| 1222|Homo sapiens putative vascular induc... 32 3.2
AC005321-2|AAC27373.1| 606|Homo sapiens TFE2_HUMAN protein. 32 3.2
AB183549-1|BAD27574.1| 1222|Homo sapiens developmentally regulat... 32 3.2
AB183548-1|BAD27573.1| 1250|Homo sapiens developmentally regulat... 32 3.2
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 31 4.3
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 33.5 bits (73), Expect = 1.1
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Frame = +1
Query: 376 GEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHS-SLLSNAQYSTQ 552
G G ++R+ + S G S + S RG + Y + +S S S + YS
Sbjct: 112 GGYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYGRSPYSRSPYSRSRYSRSPYSRS 171
Query: 553 AINRN----SHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGLST 690
+ SHYS+S +SNS Y H +S S S+ S + S S+
Sbjct: 172 RYRESRYGGSHYSSSGYSNSRYSRYH-SSRSHSKSGSSTSSRSASTSKSS 220
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 33.5 bits (73), Expect = 1.1
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = +1
Query: 385 GSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHS-SLLSNAQYSTQAIN 561
G ++R+ + S G S + S RG + Y + +S S S + YS
Sbjct: 112 GRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYR 171
Query: 562 RN----SHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGLST 690
+ SHYS+S +SNS Y H +S S S+ S + S S+
Sbjct: 172 ESRYGGSHYSSSGYSNSRYSRYH-SSRSHSKSGSSTSSRSASTSKSS 217
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 33.5 bits (73), Expect = 1.1
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = +1
Query: 385 GSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHS-SLLSNAQYSTQAIN 561
G ++R+ + S G S + S RG + Y + +S S S + YS
Sbjct: 122 GRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYR 181
Query: 562 RN----SHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGLST 690
+ SHYS+S +SNS Y H +S S S+ S + S S+
Sbjct: 182 ESRYGGSHYSSSGYSNSRYSRYH-SSRSHSKSGSSTSSRSASTSKSS 227
>M95586-1|AAA58445.1| 574|Homo sapiens E2A/HLF fusion protein
protein.
Length = 574
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 427 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 534
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 55 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 91
>M31523-1|AAA61146.1| 654|Homo sapiens TCF3 protein.
Length = 654
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 427 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 534
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 55 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 91
>M31222-1|AAA52331.1| 648|Homo sapiens TCF3 protein.
Length = 648
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 427 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 534
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 49 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 85
>BC110579-1|AAI10580.1| 651|Homo sapiens TCF3 protein protein.
Length = 651
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 427 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 534
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 55 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 91
>BC075798-1|AAH75798.1| 1222|Homo sapiens GPR126 protein protein.
Length = 1222
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +1
Query: 544 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 678
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 1134 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 1182
>AY181244-1|AAO27356.1| 541|Homo sapiens G protein-coupled receptor
126 protein.
Length = 541
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +1
Query: 544 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 678
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 453 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 501
>AF216967-1|AAO13250.1| 1222|Homo sapiens putative vascular inducible
G protein-coupled receptor protein.
Length = 1222
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +1
Query: 544 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 678
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 1134 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 1182
>AC005321-2|AAC27373.1| 606|Homo sapiens TFE2_HUMAN protein.
Length = 606
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 427 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 534
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 7 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 43
>AB183549-1|BAD27574.1| 1222|Homo sapiens developmentally regulated
G-protein-coupled receptor beta 2 protein.
Length = 1222
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +1
Query: 544 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 678
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 1134 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 1182
>AB183548-1|BAD27573.1| 1250|Homo sapiens developmentally regulated
G-protein-coupled receptor beta 1 protein.
Length = 1250
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +1
Query: 544 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 678
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 1162 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 1210
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 31.5 bits (68), Expect = 4.3
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Frame = +1
Query: 271 AQRGNMGGNYERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSG 450
++RG G +YE++ + + H S SQ + S +R+ S T + GS
Sbjct: 3441 SRRGRQGSHYEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQSGDGS- 3499
Query: 451 NYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNS--NYRNSHRA 624
+ S+ + + T D++ S Q + +RN S SQ S+S + +S R
Sbjct: 3500 RHSWSH----HHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERW 3555
Query: 625 SPSQSQH---ISDLQASDGSQ 678
S S S++ + Q+ DGS+
Sbjct: 3556 SGSASRNHRGSAQEQSRDGSR 3576
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,300,756
Number of Sequences: 237096
Number of extensions: 2261240
Number of successful extensions: 4742
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4735
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -