Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_F06
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69383-1|CAA93412.1| 409|Caenorhabditis elegans Hypothetical pr... 35 0.090
Z50797-7|CAD27609.1| 195|Caenorhabditis elegans Hypothetical pr... 34 0.12
AB086410-1|BAC44993.1| 195|Caenorhabditis elegans ABF-6 protein. 34 0.12
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 34 0.16
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 32 0.48
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 32 0.48
Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical pr... 32 0.64
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z70681-3|CAA94579.2| 403|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 29 5.9
Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41016-5|AAP46274.1| 811|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41016-3|AAM51497.1| 901|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z69383-1|CAA93412.1| 409|Caenorhabditis elegans Hypothetical
protein F13E9.4 protein.
Length = 409
Score = 34.7 bits (76), Expect = 0.090
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = +1
Query: 265 YGAQRGNMGGNYERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYG 444
YG Q ++ + + + SG+++ G+ G ++ G + +G +G
Sbjct: 113 YGQQAFAQQQRPQQGFQSNGFSGQQASGSMNSFGGQGGYGQNQNGFGGQSGFSGQSG-WG 171
Query: 445 SGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFS-NSNYRNSHR 621
S + +N G N Q G+ ++ Q + + NS SN+ +S NS Y N++
Sbjct: 172 SNSLSSANSNGNNNQ-GSSSGYQNNQGRHQGQGGGHSSSSNSVMSNNGYSSNSGYGNNNG 230
Query: 622 ASPSQSQHISDLQASD 669
+PS ++S A D
Sbjct: 231 PTPSFLNNVSSSAAQD 246
>Z50797-7|CAD27609.1| 195|Caenorhabditis elegans Hypothetical
protein T22H6.7 protein.
Length = 195
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 385 GSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAI-- 558
G+ + Y N+ + + Y+ +N G Q N++S+ SN QYS Q
Sbjct: 105 GNNNGYNNGYNNGNNMRYNDNNGYNTNN--GYRGQPTPGYGNSNSNFNSNQQYSYQQYYN 162
Query: 559 NRNSHYSNSQFSNS 600
NRN+ Y NS + N+
Sbjct: 163 NRNNQYGNSGYGNA 176
>AB086410-1|BAC44993.1| 195|Caenorhabditis elegans ABF-6 protein.
Length = 195
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 385 GSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAI-- 558
G+ + Y N+ + + Y+ +N G Q N++S+ SN QYS Q
Sbjct: 105 GNNNGYNNGYNNGNNMRYNDNNGYNTNN--GYRGQPTPGYGNSNSNFNSNQQYSYQQYYN 162
Query: 559 NRNSHYSNSQFSNS 600
NRN+ Y NS + N+
Sbjct: 163 NRNNQYGNSGYGNA 176
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 33.9 bits (74), Expect = 0.16
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +1
Query: 268 GAQRGNMGGNYERAHNMDSL-AQRHLSGAISQVEGELGEEGSKTR---TGSVYTAANSAG 435
G+ RGN GG N SL + SG SQ G G +R G+ Y +
Sbjct: 222 GSGRGNHGGGRRNYGNQRSLHTNNNESGQHSQ-NGHSGHRNVYSRGNYRGNKYNSRGRMD 280
Query: 436 FYGSGNYDLSNLRGRNFQEGTYLD-NAHSSLLSNAQ 540
++G D + N QE L N H S+ SN Q
Sbjct: 281 YHGKARNDNPSYMANNVQELPELAVNTHGSIDSNVQ 316
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 33.9 bits (74), Expect = 0.16
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +1
Query: 268 GAQRGNMGGNYERAHNMDSL-AQRHLSGAISQVEGELGEEGSKTR---TGSVYTAANSAG 435
G+ RGN GG N SL + SG SQ G G +R G+ Y +
Sbjct: 222 GSGRGNHGGGRRNYGNQRSLHTNNNESGQHSQ-NGHSGHRNVYSRGNYRGNKYNSRGRMD 280
Query: 436 FYGSGNYDLSNLRGRNFQEGTYLD-NAHSSLLSNAQ 540
++G D + N QE L N H S+ SN Q
Sbjct: 281 YHGKARNDNPSYMANNVQELPELAVNTHGSIDSNVQ 316
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +1
Query: 415 TAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFS 594
+ +NS G+ G G + G N+ G DN + +N N N++Y NS +
Sbjct: 202 SGSNSGGYNGGGG---GSGGGSNWNNG---DNENDGWNNNNNNRKSNNNNNNNYGNSWGT 255
Query: 595 NSNYRNSHRASPSQSQHISDLQASDGS 675
N N NS + S + + + + S GS
Sbjct: 256 NDNDGNSWKGSGNSNGNSDNWGGSSGS 282
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +1
Query: 415 TAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFS 594
+ +NS G+ G G + G N+ G DN + +N N N++Y NS +
Sbjct: 202 SGSNSGGYNGGGG---GSGGGSNWNNG---DNENDGWNNNNNNRKSNNNNNNNYGNSWGT 255
Query: 595 NSNYRNSHRASPSQSQHISDLQASDGS 675
N N NS + S + + + + S GS
Sbjct: 256 NDNDGNSWKGSGNSNGNSDNWGGSSGS 282
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 7/126 (5%)
Frame = +1
Query: 262 FYGAQRGNMGGNYERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFY 441
+YG+ NY+ S + + + G + S ++ +N
Sbjct: 405 YYGSSVSTTPRNYDEMSTASSNSTHTTTSNYNNRNGSRNGGNQYYESRSSFSNSNEWRSR 464
Query: 442 GSGN-------YDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNS 600
G GN Y +N R N G + N + +N Q NR +HY N Q
Sbjct: 465 GGGNGGRFQNNYSENNGRQSNGSNGRWRGNNRNGATTNGYGYQQHNNRQNHYQNGQ-QRE 523
Query: 601 NYRNSH 618
N N H
Sbjct: 524 NGENGH 529
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 7/126 (5%)
Frame = +1
Query: 262 FYGAQRGNMGGNYERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFY 441
+YG+ NY+ S + + + G + S ++ +N
Sbjct: 307 YYGSSVSTTPRNYDEMSTASSNSTHTTTSNYNNRNGSRNGGNQYYESRSSFSNSNEWRSR 366
Query: 442 GSGN-------YDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNS 600
G GN Y +N R N G + N + +N Q NR +HY N Q
Sbjct: 367 GGGNGGRFQNNYSENNGRQSNGSNGRWRGNNRNGATTNGYGYQQHNNRQNHYQNGQ-QRE 425
Query: 601 NYRNSH 618
N N H
Sbjct: 426 NGENGH 431
>Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical protein
T21B10.3 protein.
Length = 1170
Score = 31.9 bits (69), Expect = 0.64
Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 3/127 (2%)
Frame = +1
Query: 274 QRGNMGGNYERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGN 453
Q G G N R N + SG + G V+ Y + +
Sbjct: 921 QTGYQGKN--RRSNFEQPTSSRGSGRSDRTYAYKGNRFQPVNDSHVFAPRERENVYQNSS 978
Query: 454 YDLS---NLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRA 624
+D N QE YLD+ S + S + R S +S++ N N+ N
Sbjct: 979 HDRDIPRNDYSEYDQEKLYLDDKQPRFHSENRNSND-VRRYSESKDSKYDNKNWNNRSSR 1037
Query: 625 SPSQSQH 645
PS+S++
Sbjct: 1038 WPSESEY 1044
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 31.9 bits (69), Expect = 0.64
Identities = 24/108 (22%), Positives = 48/108 (44%)
Frame = +1
Query: 322 SLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTY 501
SL + A + +E + E S R+ S ++N D SN RN+ ++
Sbjct: 566 SLLPTRILSATNVLENKYNENVSSRRSTSRERSSNRNYDERWSRNDYSN--PRNYSNRSF 623
Query: 502 LDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQH 645
S+ ++++ ++RN++ +NS+ + + R S S S + H
Sbjct: 624 HQRNQRGHSSSNRFNSPFVSRNNYNNNSETTEGSSRRSEYNSSSSNHH 671
>Z70681-3|CAA94579.2| 403|Caenorhabditis elegans Hypothetical
protein C30F2.3 protein.
Length = 403
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 439 YGSGNYDLSNLRGRNFQEGTYLDNA--HSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRN 612
Y + SN+ G N+ G+ A +S +NAQYS + Y QF+ + +
Sbjct: 122 YSNTGSSSSNIYGYNYNSGSSGSQATGSNSYSNNAQYSAPTNPQPYIYPFGQFAPAGSSS 181
Query: 613 SHRASPSQSQHISDLQASDGSQGLSTI 693
S+ Q+ +I S S G + I
Sbjct: 182 SNPVLRDQNSNIYTSTMSPTSSGTNNI 208
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = -2
Query: 691 LLITLVSHLKLVGHLYVVTEMEMHDDYFDNSNY*IDYCYNENFYLSLA 548
++I L+ ++ + LY ++ M++H+ Y ++ I +NE F LSLA
Sbjct: 145 MVILLMQSVRSLRQLYTIS-MDVHNRYRTEAHNEITARFNERFILSLA 191
>Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical
protein T06G6.2 protein.
Length = 339
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -2
Query: 580 CYNENFYLSLAYYIARWIT-MRSAHYLGTFLLENY--VPLGY 464
CY +YLS YY++ ++ ++ LGT+ + Y PLGY
Sbjct: 138 CYTPKYYLSHQYYVSIFLLFIQLIFTLGTYYVGLYGVPPLGY 179
>U41016-5|AAP46274.1| 811|Caenorhabditis elegans Hypothetical
protein R11G1.6c protein.
Length = 811
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +1
Query: 370 ELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYST 549
EL S+ ++ T F+G LS RGR+ + +D ++ LL A S
Sbjct: 584 ELDVRQSRDKSKKAPTEKRDRSFFGELKDRLSGRRGRSQKRSKSVDVENNQLLEEA-VSL 642
Query: 550 QAINRNSHYSNSQFSNSNYRNSH 618
S + SN YR +H
Sbjct: 643 PPSRDPSRTRYAVSSNDKYRETH 665
>U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical
protein R11G1.6d protein.
Length = 809
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +1
Query: 370 ELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYST 549
EL S+ ++ T F+G LS RGR+ + +D ++ LL A S
Sbjct: 584 ELDVRQSRDKSKKAPTEKRDRSFFGELKDRLSGRRGRSQKRSKSVDVENNQLLEEA-VSL 642
Query: 550 QAINRNSHYSNSQFSNSNYRNSH 618
S + SN YR +H
Sbjct: 643 PPSRDPSRTRYAVSSNDKYRETH 665
>U41016-3|AAM51497.1| 901|Caenorhabditis elegans Hypothetical
protein R11G1.6b protein.
Length = 901
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +1
Query: 370 ELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYST 549
EL S+ ++ T F+G LS RGR+ + +D ++ LL A S
Sbjct: 674 ELDVRQSRDKSKKAPTEKRDRSFFGELKDRLSGRRGRSQKRSKSVDVENNQLLEEA-VSL 732
Query: 550 QAINRNSHYSNSQFSNSNYRNSH 618
S + SN YR +H
Sbjct: 733 PPSRDPSRTRYAVSSNDKYRETH 755
>U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical
protein R11G1.6a protein.
Length = 899
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +1
Query: 370 ELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYST 549
EL S+ ++ T F+G LS RGR+ + +D ++ LL A S
Sbjct: 674 ELDVRQSRDKSKKAPTEKRDRSFFGELKDRLSGRRGRSQKRSKSVDVENNQLLEEA-VSL 732
Query: 550 QAINRNSHYSNSQFSNSNYRNSH 618
S + SN YR +H
Sbjct: 733 PPSRDPSRTRYAVSSNDKYRETH 755
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,045,378
Number of Sequences: 27780
Number of extensions: 378943
Number of successful extensions: 1179
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -