Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_F05
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007208-1|AAH07208.1| 855|Homo sapiens XPA binding protein 2 p... 349 6e-96
AF547265-1|AAN17847.1| 855|Homo sapiens HCNP protein; XPA-bindi... 349 6e-96
AF272147-1|AAQ14304.1| 852|Homo sapiens crn-related protein kim... 349 6e-96
AF258567-1|AAG23770.1| 855|Homo sapiens PP3898 protein. 349 6e-96
AB026111-1|BAB15807.1| 855|Homo sapiens XAB2 protein. 349 1e-95
AF226051-1|AAF86951.1| 855|Homo sapiens HCNP protein. 347 2e-95
AB033003-1|BAA86491.1| 755|Homo sapiens KIAA1177 protein protein. 248 2e-65
AK074035-1|BAB84861.1| 333|Homo sapiens FLJ00081 protein protein. 73 2e-12
BC008778-1|AAH08778.1| 635|Homo sapiens XAB2 protein protein. 62 3e-09
AL035454-2|CAI42112.1| 836|Homo sapiens Crn, crooked neck-like ... 43 0.002
AL035454-1|CAI42113.1| 848|Homo sapiens Crn, crooked neck-like ... 43 0.002
AF318303-1|AAK01925.1| 848|Homo sapiens CGI-201 protein, type I... 43 0.002
AF318302-1|AAK01924.1| 687|Homo sapiens CGI-201 protein, short ... 43 0.002
AF255443-1|AAF65571.2| 836|Homo sapiens CGI-201 protein protein. 43 0.002
AF111802-1|AAL39004.1| 687|Homo sapiens MSTP021 protein. 43 0.002
AB016840-1|BAC53587.1| 687|Homo sapiens crn protein. 43 0.002
U15782-1|AAA61417.1| 717|Homo sapiens cleavage stimulation fact... 38 0.049
BC108319-1|AAI08320.1| 717|Homo sapiens cleavage stimulation fa... 38 0.049
AL121926-1|CAC48252.1| 708|Homo sapiens dJ85M6.1 (cleavage stim... 38 0.049
D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein. 36 0.26
BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma... 36 0.26
BC103706-1|AAI03707.1| 615|Homo sapiens SART3 protein protein. 36 0.26
BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma... 36 0.26
BC032601-1|AAH32601.1| 615|Homo sapiens SART3 protein protein. 36 0.26
AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma... 36 0.26
BC118673-1|AAI18674.1| 933|Homo sapiens C14orf102 protein protein. 34 0.79
BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open read... 34 0.79
AK024113-1|BAB14830.1| 696|Homo sapiens protein ( Homo sapiens ... 34 0.79
BC125127-1|AAI25128.1| 629|Homo sapiens PRPF39 protein protein. 33 1.4
BC125126-1|AAI25127.1| 629|Homo sapiens PRPF39 protein protein. 33 1.4
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 32 2.4
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 32 2.4
AK023728-1|BAB14659.1| 512|Homo sapiens protein ( Homo sapiens ... 31 4.2
>BC007208-1|AAH07208.1| 855|Homo sapiens XPA binding protein 2
protein.
Length = 855
Score = 349 bits (859), Expect = 6e-96
Identities = 156/226 (69%), Positives = 185/226 (81%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F VK WLRYIE K+ APK +N +YERALK LP S+KLWY YLK RR Q++ RC+ DP Y
Sbjct: 33 FSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAY 92
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
EDVNNC ER+ VFMHKMPR+W+DYC FL DQ ++T TR+ FD ALRALPITQH RIWPLY
Sbjct: 93 EDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLY 152
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSK 697
L FL+ H +PETAVR +RR+LKL PE EEYI+YL S D+LDEAA +LA +VN+E F SK
Sbjct: 153 LRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSK 212
Query: 698 HGKSNHQLWNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
GKSN+QLW+ELC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 213 AGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 258
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 259 WCSLADYYIRSGHFEKA 275
>AF547265-1|AAN17847.1| 855|Homo sapiens HCNP protein; XPA-binding
protein 2 protein.
Length = 855
Score = 349 bits (859), Expect = 6e-96
Identities = 156/226 (69%), Positives = 185/226 (81%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F VK WLRYIE K+ APK +N +YERALK LP S+KLWY YLK RR Q++ RC+ DP Y
Sbjct: 33 FSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAY 92
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
EDVNNC ER+ VFMHKMPR+W+DYC FL DQ ++T TR+ FD ALRALPITQH RIWPLY
Sbjct: 93 EDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLY 152
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSK 697
L FL+ H +PETAVR +RR+LKL PE EEYI+YL S D+LDEAA +LA +VN+E F SK
Sbjct: 153 LRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSK 212
Query: 698 HGKSNHQLWNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
GKSN+QLW+ELC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 213 AGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 258
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 259 WCSLADYYIRSGHFEKA 275
>AF272147-1|AAQ14304.1| 852|Homo sapiens crn-related protein kim1
protein.
Length = 852
Score = 349 bits (859), Expect = 6e-96
Identities = 156/226 (69%), Positives = 185/226 (81%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F VK WLRYIE K+ APK +N +YERALK LP S+KLWY YLK RR Q++ RC+ DP Y
Sbjct: 30 FSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAY 89
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
EDVNNC ER+ VFMHKMPR+W+DYC FL DQ ++T TR+ FD ALRALPITQH RIWPLY
Sbjct: 90 EDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLY 149
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSK 697
L FL+ H +PETAVR +RR+LKL PE EEYI+YL S D+LDEAA +LA +VN+E F SK
Sbjct: 150 LRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSK 209
Query: 698 HGKSNHQLWNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
GKSN+QLW+ELC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 210 AGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 255
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 256 WCSLADYYIRSGHFEKA 272
>AF258567-1|AAG23770.1| 855|Homo sapiens PP3898 protein.
Length = 855
Score = 349 bits (859), Expect = 6e-96
Identities = 156/226 (69%), Positives = 185/226 (81%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F VK WLRYIE K+ APK +N +YERALK LP S+KLWY YLK RR Q++ RC+ DP Y
Sbjct: 33 FSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAY 92
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
EDVNNC ER+ VFMHKMPR+W+DYC FL DQ ++T TR+ FD ALRALPITQH RIWPLY
Sbjct: 93 EDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLY 152
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSK 697
L FL+ H +PETAVR +RR+LKL PE EEYI+YL S D+LDEAA +LA +VN+E F SK
Sbjct: 153 LRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSK 212
Query: 698 HGKSNHQLWNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
GKSN+QLW+ELC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 213 AGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 258
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 259 WCSLADYYIRSGHFEKA 275
>AB026111-1|BAB15807.1| 855|Homo sapiens XAB2 protein.
Length = 855
Score = 349 bits (857), Expect = 1e-95
Identities = 155/226 (68%), Positives = 185/226 (81%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F VK WLRYIE K+ APK +N +YERALK LP S+KLWY YLK RR Q++ RC+ DP Y
Sbjct: 33 FSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAY 92
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
EDVNNC ER+ VFMHKMPR+W+DYC FL DQ ++T TR+ FD ALRA+PITQH RIWPLY
Sbjct: 93 EDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRAMPITQHSRIWPLY 152
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSK 697
L FL+ H +PETAVR +RR+LKL PE EEYI+YL S D+LDEAA +LA +VN+E F SK
Sbjct: 153 LRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSK 212
Query: 698 HGKSNHQLWNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
GKSN+QLW+ELC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 213 AGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 258
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 259 WCSLADYYIRSGHFEKA 275
>AF226051-1|AAF86951.1| 855|Homo sapiens HCNP protein.
Length = 855
Score = 347 bits (854), Expect = 2e-95
Identities = 156/226 (69%), Positives = 184/226 (81%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F VK WLRYIE K+ APK +N +YERALK LP S KLWY YLK RR Q++ RC+ DP Y
Sbjct: 33 FSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSTKLWYRYLKARRAQVKHRCVTDPAY 92
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
EDVNNC ER+ VFMHKMPR+W+DYC FL DQ ++T TR+ FD ALRALPITQH RIWPLY
Sbjct: 93 EDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLY 152
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSK 697
L FL+ H +PETAVR +RR+LKL PE EEYI+YL S D+LDEAA +LA +VN+E F SK
Sbjct: 153 LRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSK 212
Query: 698 HGKSNHQLWNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
GKSN+QLW+ELC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 213 AGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 258
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 259 WCSLADYYIRSGHFEKA 275
>AB033003-1|BAA86491.1| 755|Homo sapiens KIAA1177 protein protein.
Length = 755
Score = 248 bits (608), Expect = 2e-65
Identities = 111/158 (70%), Positives = 133/158 (84%)
Frame = +2
Query: 362 RSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKKHN 541
R+ VFMHKMPR+W+DYC FL DQ ++T TR+ FD ALRALPITQH RIWPLYL FL+ H
Sbjct: 1 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHP 60
Query: 542 IPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQL 721
+PETAVR +RR+LKL PE EEYI+YL S D+LDEAA +LA +VN+E F SK GKSN+QL
Sbjct: 61 LPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQL 120
Query: 722 WNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
W+ELC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 121 WHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 158
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 159 WCSLADYYIRSGHFEKA 175
>AK074035-1|BAB84861.1| 333|Homo sapiens FLJ00081 protein protein.
Length = 333
Score = 72.5 bits (170), Expect = 2e-12
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +2
Query: 716 QLWNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
QLW+ELC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 10 QLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 49
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 50 WCSLADYYIRSGHFEKA 66
>BC008778-1|AAH08778.1| 635|Homo sapiens XAB2 protein protein.
Length = 635
Score = 62.1 bits (144), Expect = 3e-09
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +2
Query: 731 LCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
LC+LIS+NPD++ SLNVDAIIRGGL R+TDQLG L
Sbjct: 4 LCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKL 38
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RSG FE+A
Sbjct: 39 WCSLADYYIRSGHFEKA 55
>AL035454-2|CAI42112.1| 836|Homo sapiens Crn, crooked neck-like 1
(Drosophila) protein.
Length = 836
Score = 42.7 bits (96), Expect = 0.002
Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +2
Query: 161 LVKHWLRYIEHKKTAPK-HEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
++ +W++Y + +++ + IYERAL + LW Y ++ K +
Sbjct: 229 VISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ--------V 280
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
N ++R++ + ++ + W Y + R+ F+ + P + W Y
Sbjct: 281 NHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP---EEQAWHSY 337
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDY 619
+NF ++ + A ++ R++ + P D + +I Y
Sbjct: 338 INFELRYKEVDRARTIYERFVLVHP-DVKNWIKY 370
Score = 33.9 bits (74), Expect = 0.79
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +2
Query: 173 WLRYIEHK-KTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVN 349
WL+Y E + K + I++RA+ LP + WY Y + +++ G
Sbjct: 267 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYM--EEMLGNVAG------AR 318
Query: 350 NCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFL 529
FER + + + + W Y +F ++ R ++ + P ++ W Y F
Sbjct: 319 QVFERWMEWQPE-EQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKN---WIKYARFE 374
Query: 530 KKHNIPETAVRVFRR 574
+KH A +V+ R
Sbjct: 375 EKHAYFAHARKVYER 389
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 356 FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKK 535
+ER+L ++ +W+ Y ++ R +D A+ LP + ++ W Y +
Sbjct: 253 YERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLP--RVNQFWYKYTYMEEM 310
Query: 536 HNIPETAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLDEA 649
A +VF R+++ PE+ YI++ ++D A
Sbjct: 311 LGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRA 350
>AL035454-1|CAI42113.1| 848|Homo sapiens Crn, crooked neck-like 1
(Drosophila) protein.
Length = 848
Score = 42.7 bits (96), Expect = 0.002
Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +2
Query: 161 LVKHWLRYIEHKKTAPK-HEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
++ +W++Y + +++ + IYERAL + LW Y ++ K +
Sbjct: 241 VISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ--------V 292
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
N ++R++ + ++ + W Y + R+ F+ + P + W Y
Sbjct: 293 NHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP---EEQAWHSY 349
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDY 619
+NF ++ + A ++ R++ + P D + +I Y
Sbjct: 350 INFELRYKEVDRARTIYERFVLVHP-DVKNWIKY 382
Score = 33.9 bits (74), Expect = 0.79
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +2
Query: 173 WLRYIEHK-KTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVN 349
WL+Y E + K + I++RA+ LP + WY Y + +++ G
Sbjct: 279 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYM--EEMLGNVAG------AR 330
Query: 350 NCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFL 529
FER + + + + W Y +F ++ R ++ + P ++ W Y F
Sbjct: 331 QVFERWMEWQPE-EQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKN---WIKYARFE 386
Query: 530 KKHNIPETAVRVFRR 574
+KH A +V+ R
Sbjct: 387 EKHAYFAHARKVYER 401
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 356 FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKK 535
+ER+L ++ +W+ Y ++ R +D A+ LP + ++ W Y +
Sbjct: 265 YERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLP--RVNQFWYKYTYMEEM 322
Query: 536 HNIPETAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLDEA 649
A +VF R+++ PE+ YI++ ++D A
Sbjct: 323 LGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRA 362
>AF318303-1|AAK01925.1| 848|Homo sapiens CGI-201 protein, type II
protein.
Length = 848
Score = 42.7 bits (96), Expect = 0.002
Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +2
Query: 161 LVKHWLRYIEHKKTAPK-HEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
++ +W++Y + +++ + IYERAL + LW Y ++ K +
Sbjct: 241 VISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ--------V 292
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
N ++R++ + ++ + W Y + R+ F+ + P + W Y
Sbjct: 293 NHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP---EEQAWHSY 349
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDY 619
+NF ++ + A ++ R++ + P D + +I Y
Sbjct: 350 INFELRYKEVDRARTIYERFVLVHP-DVKNWIKY 382
Score = 33.9 bits (74), Expect = 0.79
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +2
Query: 173 WLRYIEHK-KTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVN 349
WL+Y E + K + I++RA+ LP + WY Y + +++ G
Sbjct: 279 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYM--EEMLGNVAG------AR 330
Query: 350 NCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFL 529
FER + + + + W Y +F ++ R ++ + P ++ W Y F
Sbjct: 331 QVFERWMEWQPE-EQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKN---WIKYARFE 386
Query: 530 KKHNIPETAVRVFRR 574
+KH A +V+ R
Sbjct: 387 EKHAYFAHARKVYER 401
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 356 FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKK 535
+ER+L ++ +W+ Y ++ R +D A+ LP + ++ W Y +
Sbjct: 265 YERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLP--RVNQFWYKYTYMEEM 322
Query: 536 HNIPETAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLDEA 649
A +VF R+++ PE+ YI++ ++D A
Sbjct: 323 LGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRA 362
>AF318302-1|AAK01924.1| 687|Homo sapiens CGI-201 protein, short
form protein.
Length = 687
Score = 42.7 bits (96), Expect = 0.002
Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +2
Query: 161 LVKHWLRYIEHKKTAPK-HEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
++ +W++Y + +++ + IYERAL + LW Y ++ K +
Sbjct: 80 VISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ--------V 131
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
N ++R++ + ++ + W Y + R+ F+ + P + W Y
Sbjct: 132 NHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP---EEQAWHSY 188
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDY 619
+NF ++ + A ++ R++ + P D + +I Y
Sbjct: 189 INFELRYKEVDRARTIYERFVLVHP-DVKNWIKY 221
Score = 33.9 bits (74), Expect = 0.79
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +2
Query: 173 WLRYIEHK-KTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVN 349
WL+Y E + K + I++RA+ LP + WY Y + +++ G
Sbjct: 118 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYM--EEMLGNVAG------AR 169
Query: 350 NCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFL 529
FER + + + + W Y +F ++ R ++ + P ++ W Y F
Sbjct: 170 QVFERWMEWQPE-EQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKN---WIKYARFE 225
Query: 530 KKHNIPETAVRVFRR 574
+KH A +V+ R
Sbjct: 226 EKHAYFAHARKVYER 240
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 356 FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKK 535
+ER+L ++ +W+ Y ++ R +D A+ LP + ++ W Y +
Sbjct: 104 YERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLP--RVNQFWYKYTYMEEM 161
Query: 536 HNIPETAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLDEA 649
A +VF R+++ PE+ YI++ ++D A
Sbjct: 162 LGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRA 201
>AF255443-1|AAF65571.2| 836|Homo sapiens CGI-201 protein protein.
Length = 836
Score = 42.7 bits (96), Expect = 0.002
Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +2
Query: 161 LVKHWLRYIEHKKTAPK-HEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
++ +W++Y + +++ + IYERAL + LW Y ++ K +
Sbjct: 229 VISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ--------V 280
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
N ++R++ + ++ + W Y + R+ F+ + P + W Y
Sbjct: 281 NHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP---EEQAWHSY 337
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDY 619
+NF ++ + A ++ R++ + P D + +I Y
Sbjct: 338 INFELRYKEVDRARTIYERFVLVHP-DVKNWIKY 370
Score = 33.9 bits (74), Expect = 0.79
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +2
Query: 173 WLRYIEHK-KTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVN 349
WL+Y E + K + I++RA+ LP + WY Y + +++ G
Sbjct: 267 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYM--EEMLGNVAG------AR 318
Query: 350 NCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFL 529
FER + + + + W Y +F ++ R ++ + P ++ W Y F
Sbjct: 319 QVFERWMEWQPE-EQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKN---WIKYARFE 374
Query: 530 KKHNIPETAVRVFRR 574
+KH A +V+ R
Sbjct: 375 EKHAYFAHARKVYER 389
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 356 FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKK 535
+ER+L ++ +W+ Y ++ R +D A+ LP + ++ W Y +
Sbjct: 253 YERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLP--RVNQFWYKYTYMEEM 310
Query: 536 HNIPETAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLDEA 649
A +VF R+++ PE+ YI++ ++D A
Sbjct: 311 LGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRA 350
>AF111802-1|AAL39004.1| 687|Homo sapiens MSTP021 protein.
Length = 687
Score = 42.7 bits (96), Expect = 0.002
Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +2
Query: 161 LVKHWLRYIEHKKTAPK-HEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
++ +W++Y + +++ + IYERAL + LW Y ++ K +
Sbjct: 80 VISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ--------V 131
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
N ++R++ + ++ + W Y + R+ F+ + P + W Y
Sbjct: 132 NHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP---EEQAWHSY 188
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDY 619
+NF ++ + A ++ R++ + P D + +I Y
Sbjct: 189 INFELRYKEVDRARTIYERFVLVHP-DVKNWIKY 221
Score = 33.9 bits (74), Expect = 0.79
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +2
Query: 173 WLRYIEHK-KTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVN 349
WL+Y E + K + I++RA+ LP + WY Y + +++ G
Sbjct: 118 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYM--EEMLGNVAG------AR 169
Query: 350 NCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFL 529
FER + + + + W Y +F ++ R ++ + P ++ W Y F
Sbjct: 170 QVFERWMEWQPE-EQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKN---WIKYARFE 225
Query: 530 KKHNIPETAVRVFRR 574
+KH A +V+ R
Sbjct: 226 EKHAYFAHARKVYER 240
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 356 FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKK 535
+ER+L ++ +W+ Y ++ R +D A+ LP + ++ W Y +
Sbjct: 104 YERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLP--RVNQFWYKYTYMEEM 161
Query: 536 HNIPETAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLDEA 649
A +VF R+++ PE+ YI++ ++D A
Sbjct: 162 LGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRA 201
>AB016840-1|BAC53587.1| 687|Homo sapiens crn protein.
Length = 687
Score = 42.7 bits (96), Expect = 0.002
Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +2
Query: 161 LVKHWLRYIEHKKTAPK-HEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
++ +W++Y + +++ + IYERAL + LW Y ++ K +
Sbjct: 80 VISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ--------V 131
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
N ++R++ + ++ + W Y + R+ F+ + P + W Y
Sbjct: 132 NHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP---EEQAWHSY 188
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDY 619
+NF ++ + A ++ R++ + P D + +I Y
Sbjct: 189 INFELRYKEVDRARTIYERFVLVHP-DVKNWIKY 221
Score = 33.9 bits (74), Expect = 0.79
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +2
Query: 173 WLRYIEHK-KTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVN 349
WL+Y E + K + I++RA+ LP + WY Y + +++ G
Sbjct: 118 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYM--EEMLGNVAG------AR 169
Query: 350 NCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFL 529
FER + + + + W Y +F ++ R ++ + P ++ W Y F
Sbjct: 170 QVFERWMEWQPE-EQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKN---WIKYARFE 225
Query: 530 KKHNIPETAVRVFRR 574
+KH A +V+ R
Sbjct: 226 EKHAYFAHARKVYER 240
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 356 FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKK 535
+ER+L ++ +W+ Y ++ R +D A+ LP + ++ W Y +
Sbjct: 104 YERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLP--RVNQFWYKYTYMEEM 161
Query: 536 HNIPETAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLDEA 649
A +VF R+++ PE+ YI++ ++D A
Sbjct: 162 LGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRA 201
>U15782-1|AAA61417.1| 717|Homo sapiens cleavage stimulation factor
77kDa subunit protein.
Length = 717
Score = 37.9 bits (84), Expect = 0.049
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Frame = +2
Query: 173 WLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVNN 352
W I + P + YER + + P S + W Y++ +I+ + Y+ V
Sbjct: 35 WSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIE---AEIKAK-----NYDKVEK 86
Query: 353 CFERSLVFMHKMPRIWMDYCSFLTD-QYKITTTR----KAFDSALRALPI-TQHHRIWPL 514
F+R L+ + + +W Y S++ + + K+ + + +A+D AL + + ++IW
Sbjct: 87 LFQRCLMKVLHID-LWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVD 145
Query: 515 YLNFLK 532
Y+NFLK
Sbjct: 146 YINFLK 151
>BC108319-1|AAI08320.1| 717|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 3, 77kDa protein.
Length = 717
Score = 37.9 bits (84), Expect = 0.049
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Frame = +2
Query: 173 WLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVNN 352
W I + P + YER + + P S + W Y++ +I+ + Y+ V
Sbjct: 35 WSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIE---AEIKAK-----NYDKVEK 86
Query: 353 CFERSLVFMHKMPRIWMDYCSFLTD-QYKITTTR----KAFDSALRALPI-TQHHRIWPL 514
F+R L+ + + +W Y S++ + + K+ + + +A+D AL + + ++IW
Sbjct: 87 LFQRCLMKVLHID-LWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVD 145
Query: 515 YLNFLK 532
Y+NFLK
Sbjct: 146 YINFLK 151
>AL121926-1|CAC48252.1| 708|Homo sapiens dJ85M6.1 (cleavage
stimulation factor, 3' pre-RNA, subunit 3, 77kD)
protein.
Length = 708
Score = 37.9 bits (84), Expect = 0.049
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Frame = +2
Query: 173 WLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVNN 352
W I + P + YER + + P S + W Y++ +I+ + Y+ V
Sbjct: 26 WSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIE---AEIKAK-----NYDKVEK 77
Query: 353 CFERSLVFMHKMPRIWMDYCSFLTD-QYKITTTR----KAFDSALRALPI-TQHHRIWPL 514
F+R L+ + + +W Y S++ + + K+ + + +A+D AL + + ++IW
Sbjct: 78 LFQRCLMKVLHID-LWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVD 136
Query: 515 YLNFLK 532
Y+NFLK
Sbjct: 137 YINFLK 142
>D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein.
Length = 963
Score = 35.5 bits (78), Expect = 0.26
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 320 IADPCYEDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKI-TTTRKAFDSALRALPITQH 496
I DP + FER+LV +P +W+ Y +L Q K+ + A+R P T
Sbjct: 323 IGDPAR--IQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTV- 379
Query: 497 HRIWPLYLNFLKKHNIPETAVRV-FRRYLKLCPEDTEEYID 616
+W YL +++H + + V F + L +Y++
Sbjct: 380 -ALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVE 419
>BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 35.5 bits (78), Expect = 0.26
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 320 IADPCYEDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKI-TTTRKAFDSALRALPITQH 496
I DP + FER+LV +P +W+ Y +L Q K+ + A+R P T
Sbjct: 323 IGDPAR--IQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTV- 379
Query: 497 HRIWPLYLNFLKKHNIPETAVRV-FRRYLKLCPEDTEEYID 616
+W YL +++H + + V F + L +Y++
Sbjct: 380 -ALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVE 419
>BC103706-1|AAI03707.1| 615|Homo sapiens SART3 protein protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.26
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 320 IADPCYEDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKI-TTTRKAFDSALRALPITQH 496
I DP + FER+LV +P +W+ Y +L Q K+ + A+R P T
Sbjct: 323 IGDPAR--IQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTV- 379
Query: 497 HRIWPLYLNFLKKHNIPETAVRV-FRRYLKLCPEDTEEYID 616
+W YL +++H + + V F + L +Y++
Sbjct: 380 -ALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVE 419
>BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 35.5 bits (78), Expect = 0.26
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 320 IADPCYEDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKI-TTTRKAFDSALRALPITQH 496
I DP + FER+LV +P +W+ Y +L Q K+ + A+R P T
Sbjct: 323 IGDPAR--IQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTV- 379
Query: 497 HRIWPLYLNFLKKHNIPETAVRV-FRRYLKLCPEDTEEYID 616
+W YL +++H + + V F + L +Y++
Sbjct: 380 -ALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVE 419
>BC032601-1|AAH32601.1| 615|Homo sapiens SART3 protein protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.26
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 320 IADPCYEDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKI-TTTRKAFDSALRALPITQH 496
I DP + FER+LV +P +W+ Y +L Q K+ + A+R P T
Sbjct: 323 IGDPAR--IQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTV- 379
Query: 497 HRIWPLYLNFLKKHNIPETAVRV-FRRYLKLCPEDTEEYID 616
+W YL +++H + + V F + L +Y++
Sbjct: 380 -ALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVE 419
>AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma
antigen SART-3 protein.
Length = 963
Score = 35.5 bits (78), Expect = 0.26
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 320 IADPCYEDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKI-TTTRKAFDSALRALPITQH 496
I DP + FER+LV +P +W+ Y +L Q K+ + A+R P T
Sbjct: 323 IGDPAR--IQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTV- 379
Query: 497 HRIWPLYLNFLKKHNIPETAVRV-FRRYLKLCPEDTEEYID 616
+W YL +++H + + V F + L +Y++
Sbjct: 380 -ALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVE 419
>BC118673-1|AAI18674.1| 933|Homo sapiens C14orf102 protein protein.
Length = 933
Score = 33.9 bits (74), Expect = 0.79
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 458 FDSALRALPITQHHRIWPLYLNFLKKHNIPETAVRVFRRYLKLCPEDTEEYID 616
F++A+R+ +Q +W +YLNFL E + VF + L+ CP Y+D
Sbjct: 845 FENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQSCPWAKVLYLD 897
>BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open reading
frame 102 protein.
Length = 1164
Score = 33.9 bits (74), Expect = 0.79
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 458 FDSALRALPITQHHRIWPLYLNFLKKHNIPETAVRVFRRYLKLCPEDTEEYID 616
F++A+R+ +Q +W +YLNFL E + VF + L+ CP Y+D
Sbjct: 1076 FENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQSCPWAKVLYLD 1128
>AK024113-1|BAB14830.1| 696|Homo sapiens protein ( Homo sapiens
cDNA FLJ14051 fis, clone HEMBA1006812. ).
Length = 696
Score = 33.9 bits (74), Expect = 0.79
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 458 FDSALRALPITQHHRIWPLYLNFLKKHNIPETAVRVFRRYLKLCPEDTEEYID 616
F++A+R+ +Q +W +YLNFL E + VF + L+ CP Y+D
Sbjct: 608 FENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQSCPWAKVLYLD 660
>BC125127-1|AAI25128.1| 629|Homo sapiens PRPF39 protein protein.
Length = 629
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 398 WMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKKHNIPETAVRVFRRY 577
W+ ++ + + RKAFD P + W Y + K+H+ + + V+RR
Sbjct: 58 WVYLLQYVEQENHLMAARKAFDRFFIHYPYCYGY--WKKYADLEKRHDNIKPSDEVYRRG 115
Query: 578 LKLCPEDTEEYIDYL 622
L+ P + +I Y+
Sbjct: 116 LQAIPLSVDLWIHYI 130
>BC125126-1|AAI25127.1| 629|Homo sapiens PRPF39 protein protein.
Length = 629
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 398 WMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKKHNIPETAVRVFRRY 577
W+ ++ + + RKAFD P + W Y + K+H+ + + V+RR
Sbjct: 58 WVYLLQYVEQENHLMAARKAFDRFFIHYPYCYGY--WKKYADLEKRHDNIKPSDEVYRRG 115
Query: 578 LKLCPEDTEEYIDYL 622
L+ P + +I Y+
Sbjct: 116 LQAIPLSVDLWIHYI 130
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens cDNA
FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 371 VFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALR-ALPITQHHRIWPLYLNF 526
+F H++P +W+ YC Q I T +A+++AL A+ +IW YL F
Sbjct: 1003 MFNHQVPYLWLIYCLCHPLQSSIKETVEAYEAALGVAMRCDIVQKIWMDYLVF 1055
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 371 VFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALR-ALPITQHHRIWPLYLNF 526
+F H++P +W+ YC Q I T +A+++AL A+ +IW YL F
Sbjct: 1748 MFNHQVPYLWLIYCLCHPLQSSIKETVEAYEAALGVAMRCDIVQKIWMDYLVF 1800
>AK023728-1|BAB14659.1| 512|Homo sapiens protein ( Homo sapiens
cDNA FLJ13666 fis, clone PLACE1011664, moderately
similar to CROOKED NECK PROTEIN. ).
Length = 512
Score = 31.5 bits (68), Expect = 4.2
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 10/135 (7%)
Frame = +2
Query: 218 INMIYERALKELP--GSFKLWYNYLKLRRKQIRGRCIADPCYEDVNNCFERSLVFMHKMP 391
+ +IY+ AL + + +L+ NY +K R I D +E +
Sbjct: 96 VRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNY 155
Query: 392 RIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWP----LYLNFLKKHNI----P 547
W DY + + R+A++ A+ +P Q R W L++N+ + P
Sbjct: 156 DAWFDYLRLVESDAEAEAVREAYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDP 215
Query: 548 ETAVRVFRRYLKLCP 592
E +V++ L+L P
Sbjct: 216 ERTRQVYQASLELIP 230
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,674,956
Number of Sequences: 237096
Number of extensions: 2016419
Number of successful extensions: 3225
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3210
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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