Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_F05
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical pr... 252 2e-67
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical pr... 39 0.005
U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein. 39 0.005
L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage stimul... 39 0.005
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z67755-2|CAA91755.2| 322|Caenorhabditis elegans Hypothetical pr... 30 1.9
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC024214-19|AAF36071.1| 451|Caenorhabditis elegans Hypothetical... 29 3.4
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 4.4
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 29 4.4
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 29 4.4
Z48544-3|CAA88438.2| 239|Caenorhabditis elegans Hypothetical pr... 29 5.9
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 29 5.9
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 29 5.9
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 29 5.9
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 29 5.9
U50311-2|AAA92308.2| 486|Caenorhabditis elegans Hypothetical pr... 28 7.8
U22184-1|AAA64847.1| 348|Caenorhabditis elegans Wnt protein pro... 28 7.8
U22179-1|AAA64846.1| 348|Caenorhabditis elegans Wnt protein pro... 28 7.8
AC006627-2|AAT68899.1| 169|Caenorhabditis elegans Abnormal cell... 28 7.8
AC006627-1|AAK85460.1| 348|Caenorhabditis elegans Abnormal cell... 28 7.8
>U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical
protein C50F2.3 protein.
Length = 855
Score = 252 bits (618), Expect = 2e-67
Identities = 116/226 (51%), Positives = 158/226 (69%), Gaps = 2/226 (0%)
Frame = +2
Query: 164 VKHWLRYIEHK--KTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
V W RYI+HK +P ++ +IYERAL S+KLWY+YLK R I +C D +
Sbjct: 40 VNCWQRYIDHKLQNKSPAKQMFLIYERALAVFERSYKLWYHYLKYRESTIVNKCPTDNSW 99
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLY 517
+ + +ER L+ +HKMPRIW+ YC + + IT TR+ FD ALR+LP+TQH RIW LY
Sbjct: 100 RALCDTYERCLMRLHKMPRIWICYCEVMIKRGLITETRRVFDRALRSLPVTQHMRIWTLY 159
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSK 697
+ FL H++PET +RV+RRYLK+ P+ E+Y++YL D++DEAA +L LVN + S+
Sbjct: 160 IGFLTSHDLPETTIRVYRRYLKMNPKAREDYVEYLIERDQIDEAAKELTTLVNQDQNVSE 219
Query: 698 HGKSNHQLWNELCELISKNPDQIHSLNVDAIIRGGLRRYTDQLGHL 835
G++ HQLW +LC+LISKNP +I SLNVDAIIR G+ RYTDQ+G L
Sbjct: 220 KGRTAHQLWTQLCDLISKNPVKIFSLNVDAIIRQGIYRYTDQVGFL 265
Score = 35.1 bits (77), Expect = 0.068
Identities = 40/200 (20%), Positives = 77/200 (38%), Gaps = 11/200 (5%)
Frame = +2
Query: 161 LVKHWLRY--IEHKKTAPKHEINMIYERALKELPGSFKLWYNY-LKLRRKQIRGRCIAD- 328
L W Y +E K K + ++ + PG ++ + ++ R I AD
Sbjct: 438 LANVWCAYAEMEMKHKRAKAALTVMQRACVVPKPGDYENMQSVQARVHRSPILWAMYADY 497
Query: 329 -PCYEDVNNC---FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQH 496
C V +C +++ + P++ M+Y FL + +A++ +
Sbjct: 498 EECCGTVESCRKVYDKMIELRVASPQMIMNYAMFLEENEYFELAFQAYEKGIALFKWPGV 557
Query: 497 HRIWPLYL-NFLKKHNIP--ETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQ 667
IW YL F+K++ E A +F + L+ CP +YI L + + + + A
Sbjct: 558 FDIWNTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKYIFLLYAKLEEEHGLARHAL 617
Query: 668 LVNNENFQSKHGKSNHQLWN 727
+ N H ++N
Sbjct: 618 SIYNRACSGVDRADMHSMYN 637
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 837 WNSLADYYVRSGLFERA 887
W SLADYY+RS FERA
Sbjct: 266 WCSLADYYIRSAEFERA 282
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 43.6 bits (98), Expect = 2e-04
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Frame = +2
Query: 170 HWLRYIEHKKTAPK-HEINMIYERALKELPGSFKLWYNY--LKLRRKQIRGRCIADPCYE 340
+W++Y + +++ + ++ERAL S +W Y +++R KQI
Sbjct: 88 NWIKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQIN---------- 137
Query: 341 DVNNCFERSLVFMHKMPRIWMDYCSFLTDQYK-ITTTRKAFDSALRALPITQHHRIWPLY 517
N F+R++ M + + W+ Y S++ + + I R+ F+ + P Q W Y
Sbjct: 138 HARNVFDRAITIMPRAMQFWLKY-SYMEEVIENIPGARQIFERWIEWEPPEQ---AWQTY 193
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDY 619
+NF ++ + A V++R+L + + + +I Y
Sbjct: 194 INFELRYKEIDRARSVYQRFLHVHGINVQNWIKY 227
Score = 36.7 bits (81), Expect = 0.022
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Frame = +2
Query: 356 FERSLVFMHKMPRIWMDYCSFLTDQYKITTTRKAFDSALRALPITQHHRIWPLYLNFLKK 535
FER+L H+ IW+ Y +I R FD A+ +P + + W Y +++++
Sbjct: 109 FERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAITIMP--RAMQFWLKY-SYMEE 165
Query: 536 --HNIPETAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLDEA 649
NIP A ++F R+++ P + + YI++ ++D A
Sbjct: 166 VIENIP-GARQIFERWIEWEPPEQAWQTYINFELRYKEIDRA 206
Score = 31.1 bits (67), Expect = 1.1
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Frame = +2
Query: 230 YERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCYEDVNNCFERSLVFM--HKMPRIWM 403
YE+ ++E ++ W++YL+L + R E+V + +ER++ + H R W
Sbjct: 325 YEKMVEENGYNYDAWFDYLRLLENEETDR-------EEVEDVYERAIANIPPHSEKRYWR 377
Query: 404 DYCSFLTDQYKI--TTTRKAFDSALR----ALPITQHH-----RIWPLYLNFLKKHNIPE 550
Y +L Y + K FD A + + I H ++W ++ +F +
Sbjct: 378 RYI-YLWINYALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLN 436
Query: 551 TAVRVFRRYLKLCPEDT--EEYIDYLTSIDKLD 643
A ++ + CP+D YID + + D
Sbjct: 437 AARKIMGVAIGKCPKDKLFRAYIDLELQLREFD 469
>Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical
protein F28C6.6 protein.
Length = 735
Score = 38.7 bits (86), Expect = 0.005
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F V W + ++ P + YE +K+ P S + W Y++ ++R + +
Sbjct: 18 FDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIE---HELRSK-----NF 69
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFL------TDQYKITTTRKAFDSALRALPI-TQH 496
E+V F R LV + + +W Y ++ DQY+ KA+D AL + + Q
Sbjct: 70 ENVEKLFSRCLVSVLNID-LWKCYIHYVFETKGQRDQYR-EEMAKAYDFALEKVGMDVQA 127
Query: 497 HRIWPLYLNFLKK 535
+ I+ Y+ FLKK
Sbjct: 128 YSIFTEYIAFLKK 140
>U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein.
Length = 730
Score = 38.7 bits (86), Expect = 0.005
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F V W + ++ P + YE +K+ P S + W Y++ ++R + +
Sbjct: 13 FDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIE---HELRSK-----NF 64
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFL------TDQYKITTTRKAFDSALRALPI-TQH 496
E+V F R LV + + +W Y ++ DQY+ KA+D AL + + Q
Sbjct: 65 ENVEKLFSRCLVSVLNID-LWKCYIHYVFETKGQRDQYR-EEMAKAYDFALEKVGMDVQA 122
Query: 497 HRIWPLYLNFLKK 535
+ I+ Y+ FLKK
Sbjct: 123 YSIFTEYIAFLKK 135
>L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage
stimulation factor protein.
Length = 735
Score = 38.7 bits (86), Expect = 0.005
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 158 FLVKHWLRYIEHKKTAPKHEINMIYERALKELPGSFKLWYNYLKLRRKQIRGRCIADPCY 337
F V W + ++ P + YE +K+ P S + W Y++ ++R + +
Sbjct: 18 FDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIE---HELRSK-----NF 69
Query: 338 EDVNNCFERSLVFMHKMPRIWMDYCSFL------TDQYKITTTRKAFDSALRALPI-TQH 496
E+V F R LV + + +W Y ++ DQY+ KA+D AL + + Q
Sbjct: 70 ENVEKLFSRCLVSVLNID-LWKCYIHYVFETKGQRDQYR-EEMAKAYDFALEKVGMDVQA 127
Query: 497 HRIWPLYLNFLKK 535
+ I+ Y+ FLKK
Sbjct: 128 YSIFTEYIAFLKK 140
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 36.7 bits (81), Expect = 0.022
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 3/125 (2%)
Frame = +2
Query: 398 WMDYCSFLTDQYKITTTRKAFDSALRALPITQHH---RIWPLYLNFLKKHNIPETAVRVF 568
W++Y S ++ + RK + AL A+ T+ +IW YLN + T +VF
Sbjct: 1489 WIEYMSHFIEKSDLAAARKTAEEALGAINPTESDELLKIWTAYLNMEVAYGDAATVQKVF 1548
Query: 569 RRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCELIS 748
R K T L+ I + E + Q++ E K + ++W L E +
Sbjct: 1549 ERACKNANAYTVH--KTLSKIYQKFEKNAEATQIL--EQMVKKFRANQLEVWTLLAEHLM 1604
Query: 749 KNPDQ 763
DQ
Sbjct: 1605 TQNDQ 1609
>Z67755-2|CAA91755.2| 322|Caenorhabditis elegans Hypothetical
protein F54F7.2 protein.
Length = 322
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 527 LKKHNIPETAVRVFRRYLKL-CPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSKH 700
LKKHN ++ R CP D + IDY+ S +K +K + ++ +++ +H
Sbjct: 220 LKKHNFGWDETKLLRLVKATQCPGDNSDTIDYVMSSEKAGSGTLKFS-MMRHQSKMDRH 277
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical protein
C18H2.1 protein.
Length = 1770
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 560 RVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCE 739
++ RY KL +DTE++ D LT + LDE + +L NF G Q ++++ +
Sbjct: 1288 KMIHRYQKLT-QDTEQFKDKLTKLKSLDEELTEAMKL----NFDVS-GDQIQQFFSDMTD 1341
Query: 740 LISKNPDQIHSLNVDAI 790
SK+ + S ++ +
Sbjct: 1342 SKSKSKINVCSSDIGIV 1358
>Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical
protein F53B7.2 protein.
Length = 572
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 267 LKDPGNSFKARSYIILISCLGAVFLCSMYLSQC 169
LK GNS + RS +++ + A+FLC L+ C
Sbjct: 339 LKTNGNSLRDRSVTLMLLAIVAIFLCCNCLAFC 371
>AC024214-19|AAF36071.1| 451|Caenorhabditis elegans Hypothetical
protein Y77E11A.1 protein.
Length = 451
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +2
Query: 593 EDTEEYIDYLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCELISKNPDQIHS 772
ED Y++ I +E K + + E HG ++ + E+C++IS+ I +
Sbjct: 319 EDESFPTKYISEILGEEEGVFKACRRICEELEVEMHGTGDYIIIREVCDVISRRGASIVA 378
Query: 773 LNVDAIIR 796
+ A++R
Sbjct: 379 AAISALLR 386
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNE-NFQS 694
++ LKK +T F R +KL P D + I Y ++ +EAA + NE NFQ
Sbjct: 1460 MSVLKKSGSMQTT---FTRKVKLEPNDCQSLITYANKLNVQEEAAGVVRYAERNEMNFQM 1516
Query: 695 K 697
+
Sbjct: 1517 R 1517
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 518 LNFLKKHNIPETAVRVFRRYLKLCPEDTEEYIDYLTSIDKLDEAAVKLAQLVNNE-NFQS 694
++ LKK +T F R +KL P D + I Y ++ +EAA + NE NFQ
Sbjct: 1460 MSVLKKSGSMQTT---FTRKVKLEPNDCQSLITYANKLNVQEEAAGVVRYAERNEMNFQM 1516
Query: 695 K 697
+
Sbjct: 1517 R 1517
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 626 SIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCELISK 751
+I D AVKLAQLV + H L+ +C LI+K
Sbjct: 570 TIRHADAIAVKLAQLVESATKNPADSVHTHFLFETICVLITK 611
>Z48544-3|CAA88438.2| 239|Caenorhabditis elegans Hypothetical
protein ZK945.4 protein.
Length = 239
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 617 YLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCELISKNPDQIHSLNVD 784
Y ++++L+EA +V +++ HG++ +L +L +K P +NVD
Sbjct: 170 YFVALEQLEEAVAYEKIIVGLKSYSRGHGEAASNFLTKLADLHNKMPKITVVVNVD 225
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 602 EEYIDYLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCE 739
EE +DY+ D +V + V N GK+ ++ ++LCE
Sbjct: 338 EEEVDYMYKFDNWTPCSVSCGKGVQTRNLYCIDGKNKGRVEDDLCE 383
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 602 EEYIDYLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCE 739
EE +DY+ D +V + V N GK+ ++ ++LCE
Sbjct: 338 EEEVDYMYKFDNWTPCSVSCGKGVQTRNLYCIDGKNKGRVEDDLCE 383
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 602 EEYIDYLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCE 739
EE +DY+ D +V + V N GK+ ++ ++LCE
Sbjct: 338 EEEVDYMYKFDNWTPCSVSCGKGVQTRNLYCIDGKNKGRVEDDLCE 383
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 711 FDFPCFD*KFSLLTS*ANLTAASSNLSIEVK*SIYSSVSSGHNLRYLRNT 562
F+ P F+ F L+ + NLTA N S+++ Y + H + T
Sbjct: 402 FNMPLFEEMFQLVGNIQNLTACYGNSSVKLDDICYKPIGKNHGCAIMSPT 451
>U50311-2|AAA92308.2| 486|Caenorhabditis elegans Hypothetical
protein C25E10.4 protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Frame = -2
Query: 249 SFKARS--YIILISCLGAVFLCSMYLS 175
SFKARS Y +++S A+F C++YLS
Sbjct: 94 SFKARSVKYPMIVSRFIAIFACTIYLS 120
>U22184-1|AAA64847.1| 348|Caenorhabditis elegans Wnt protein
protein.
Length = 348
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 255 GNSFKARSYIILISC-LGAVFLCSMYLSQCLTRKWI 151
GN F R ++ + C V+ C++ C+ +WI
Sbjct: 300 GNGFSIRHEVVRVKCDCEFVWCCNLVCKDCIQHRWI 335
>U22179-1|AAA64846.1| 348|Caenorhabditis elegans Wnt protein
protein.
Length = 348
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 255 GNSFKARSYIILISC-LGAVFLCSMYLSQCLTRKWI 151
GN F R ++ + C V+ C++ C+ +WI
Sbjct: 300 GNGFSIRHEVVRVKCDCEFVWCCNLVCKDCIQHRWI 335
>AC006627-2|AAT68899.1| 169|Caenorhabditis elegans Abnormal cell
lineage protein 44,isoform b protein.
Length = 169
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 255 GNSFKARSYIILISC-LGAVFLCSMYLSQCLTRKWI 151
GN F R ++ + C V+ C++ C+ +WI
Sbjct: 121 GNGFSIRHEVVRVKCDCEFVWCCNLVCKDCIQHRWI 156
>AC006627-1|AAK85460.1| 348|Caenorhabditis elegans Abnormal cell
lineage protein 44,isoform a protein.
Length = 348
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 255 GNSFKARSYIILISC-LGAVFLCSMYLSQCLTRKWI 151
GN F R ++ + C V+ C++ C+ +WI
Sbjct: 300 GNGFSIRHEVVRVKCDCEFVWCCNLVCKDCIQHRWI 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,928,716
Number of Sequences: 27780
Number of extensions: 329402
Number of successful extensions: 857
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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