Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F04
         (882 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0S6X5 Cluster: Microtubule-associated protein; n=2; Ni...    35   2.4  
UniRef50_A0LDE4 Cluster: Cytochrome c assembly protein; n=1; Mag...    33   7.3  
UniRef50_A6RRI8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  
UniRef50_A4RAR2 Cluster: Putative uncharacterized protein; n=3; ...    33   9.6  
UniRef50_O14559 Cluster: TC10/CDC42 GTPase-activating protein; n...    33   9.6  

>UniRef50_A0S6X5 Cluster: Microtubule-associated protein; n=2;
           Nicotiana|Rep: Microtubule-associated protein -
           Nicotiana benthamiana
          Length = 338

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 28/91 (30%), Positives = 40/91 (43%)
 Frame = +2

Query: 152 LVVALPRRKSRVKSYLHERFGLXSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTN 331
           LV +L  RK+  KS    R  +  T T    +     S   G +A + TA  K++    N
Sbjct: 65  LVQSLIDRKT--KSSFSRRGSMTYTKTPPKESLYKKTSEAKGRNAAQSTATKKHRGQNKN 122

Query: 332 VHSGGDGCLLLERTTLSGIPLIQDDNDQGMA 424
           V S  DGC        S  PL++ D ++ MA
Sbjct: 123 VGSNQDGCTENFSMISSRSPLLEKDREELMA 153


>UniRef50_A0LDE4 Cluster: Cytochrome c assembly protein; n=1;
           Magnetococcus sp. MC-1|Rep: Cytochrome c assembly
           protein - Magnetococcus sp. (strain MC-1)
          Length = 654

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 480 VEFFLGLDSWSAHWNMHQVAIPWSLS 403
           + FF+ + +W  HWN H V++PW L+
Sbjct: 103 MSFFIAVAAWR-HWNTHSVSMPWILT 127


>UniRef50_A6RRI8 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1740

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
 Frame = +2

Query: 173  RKSRVKSYLHERFGLXSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQ-IPKTNVHSGGD 349
            R SR+  YLHE FG   +   K  NAL+++   +   A R+  L+ N+ +      S  +
Sbjct: 1348 RGSRIAKYLHENFGHIFSDELKRLNALNNE---TPKDALRRAFLSLNKDLATAAAQSNEE 1404

Query: 350  GCLLLERTTLSGIPLIQDD-NDQGMAT 427
              +L +R + +   L QDD    G+AT
Sbjct: 1405 RAVLSQRGSTTPAVLSQDDLTSGGVAT 1431


>UniRef50_A4RAR2 Cluster: Putative uncharacterized protein; n=3;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 1094

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 82  IADRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPR*YFNT*DHKCSIQ 258
           + DR   IA   +LE  + +P  + S+ A Q+ PRE+L       R +  T D  CS+Q
Sbjct: 292 VKDRRMDIAS--RLEAGEPVPYTAVSAAAQQDIPREQLAKWDASARAFLKTADDMCSMQ 348


>UniRef50_O14559 Cluster: TC10/CDC42 GTPase-activating protein;
           n=12; Euteleostomi|Rep: TC10/CDC42 GTPase-activating
           protein - Homo sapiens (Human)
          Length = 1287

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1

Query: 76  LHIADRMSQIAEEQKLEESDGLPPASSS 159
           L +A+R  Q+AE+Q  +E  G PPAS S
Sbjct: 902 LALAERAQQVAEQQSQQECGGTPPASQS 929


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,270,365
Number of Sequences: 1657284
Number of extensions: 11220205
Number of successful extensions: 28369
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28356
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)