Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F02
         (931 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 825 PPPPXPXXKPPPLP 866
           PPPP P  +PP  P
Sbjct: 736 PPPPHPHHQPPRNP 749


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 825 PPPPXPXXKPPPLP 866
           PPPP P  +PP  P
Sbjct: 628 PPPPHPHHQPPRNP 641


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 790 PPEXXXGXPXXXPPPPP 840
           PP      P   PPPPP
Sbjct: 202 PPTEDCDVPSTIPPPPP 218


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = +3

Query: 780  PGXPPRXXXXGPXXXPPPPXPXXKPPPLP 866
            PG         P    PP  P  + PPLP
Sbjct: 1360 PGSTTNYPEWQPTEWHPPIPPTSEKPPLP 1388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,034
Number of Sequences: 336
Number of extensions: 2228
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)