Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_F02
(931 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 39 9e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.006
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.033
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.076
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.10
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.53
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.8
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 5.0
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 6.4
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 6.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.6
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.1 bits (87), Expect = 9e-04
Identities = 28/75 (37%), Positives = 28/75 (37%)
Frame = -2
Query: 930 GPPPGGXXXEGXXXPXPXXXXXGGXGVXXGGXGGGXXXXXPXGXFGGXXXXFXXGXGGXP 751
GPPPG G GG G GG GG G FGG F G GG
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG---FEGGPGGFGGGPGGFGGGLGG-- 253
Query: 750 PXGGGGXXFRGVXGG 706
GGG F G GG
Sbjct: 254 -FGGGPGGFGGGPGG 267
Score = 34.3 bits (75), Expect = 0.025
Identities = 25/70 (35%), Positives = 25/70 (35%)
Frame = -2
Query: 915 GXXXEGXXXPXPXXXXXGGXGVXXGGXGGGXXXXXPXGXFGGXXXXFXXGXGGXPPXGGG 736
G G P P GG G G GG G FGG F G GG GGG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFG----GFGGEGHHHGGHGGFGGGPGGFEGGPGG---FGGG 243
Query: 735 GXXFRGVXGG 706
F G GG
Sbjct: 244 PGGFGGGLGG 253
Score = 25.8 bits (54), Expect = 8.7
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = -1
Query: 865 GRGGGFXXGXGG--GGXXXGPXXXFR-GGXPGXXXGXGGXXXXXXXGVXFSGGXXGGG 701
G GG G GG GG GP GG G GG F GG G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = -1
Query: 865 GRGGGFXXGXGG-----GGXXXGPXXXFRGGXPGXXXGXG 761
G GGF G GG GG GP GG PG G G
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGF--GGGPGGHGGPG 272
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 608 GXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXP-PPPXGGXPPXPXXXXX 784
G P P AP P P+ P PP P P P P PP P
Sbjct: 1119 GAPPVPKPSVAAPP-VPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Query: 785 XXPPKXPXGXXXXXPPPXPPXKTPXP 862
P P PPP P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 36.3 bits (80), Expect = 0.006
Identities = 31/117 (26%), Positives = 33/117 (28%), Gaps = 1/117 (0%)
Frame = +2
Query: 572 PXGGEXAPXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPX- 748
P G P G P P AP P P+ PP P PP P
Sbjct: 1079 PSGAPPVPAPS-GIPPVPKPSVAAPP-VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 749 GGXPPXPXXXXXXXPPKXPXGXXXXXPPPXPPXKTPXPPXXXXXGXGXXXPSXXXPP 919
G PP P P P G P P P P P P+ PP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSG---APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Score = 34.7 bits (76), Expect = 0.019
Identities = 33/129 (25%), Positives = 35/129 (27%), Gaps = 9/129 (6%)
Frame = +2
Query: 572 PXGGEXAPXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPP--PP 745
P G P P P P P P+ PP P PP P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 746 XGGXPPXPXXXXXXXPPKXPXGXXXXXP------PPXPPXKTPXPPXXXXXG-XGXXXPS 904
G PP P PP P P PP PP T P G P+
Sbjct: 1175 SSGIPPVP-KPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Query: 905 XXXPPGGGP 931
PP P
Sbjct: 1234 AKAPPVPAP 1242
Score = 34.3 bits (75), Expect = 0.025
Identities = 26/104 (25%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Frame = +2
Query: 608 GXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXP-PPPXGGXPPXPXXXXX 784
G P P AP + P PP P + P P P G PP P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP---PP 1213
Query: 785 XXPPKXPXGXXXXXPPPXPPXKTPXPPXXXXXGXGXXXPSXXXP 916
P P P P P K P P P P
Sbjct: 1214 STAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Score = 33.9 bits (74), Expect = 0.033
Identities = 28/123 (22%), Positives = 29/123 (23%), Gaps = 3/123 (2%)
Frame = +2
Query: 572 PXGGEXAPXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXG 751
P G P P P P P+ P P P P PP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 752 GXPPXPXXXXXXXPPKXPXGXXXXXPPP---XPPXKTPXPPXXXXXGXGXXXPSXXXPPG 922
PP P PP P P P PP P PS P
Sbjct: 1196 EAPPVP-KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRS 1254
Query: 923 GGP 931
P
Sbjct: 1255 SVP 1257
Score = 32.7 bits (71), Expect = 0.076
Identities = 30/113 (26%), Positives = 30/113 (26%), Gaps = 4/113 (3%)
Frame = +2
Query: 593 PXXXXGXPXXKXPKTTAPRGXP--TPNXXPXXXGXXXXXPPPXTPRKXXPP-PPXGGXPP 763
P P P T P P TP G PP P P P G PP
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 764 XPXXXXXXXPPKXPXGXXXXXPPPXPPXKTPXPPXXXXXG-XGXXXPSXXXPP 919
P PK PP P PP G PS PP
Sbjct: 1085 VPAPSGIPPVPKPSVA-----APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 32.7 bits (71), Expect = 0.076
Identities = 23/97 (23%), Positives = 25/97 (25%), Gaps = 1/97 (1%)
Frame = +2
Query: 569 PPXGGEXAPXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXP-PPP 745
P P G P P P P P+ P PP P P P P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPP-VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Query: 746 XGGXPPXPXXXXXXXPPKXPXGXXXXXPPPXPPXKTP 856
G PP P P P P +P
Sbjct: 1223 SAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 32.3 bits (70), Expect = 0.10
Identities = 22/89 (24%), Positives = 23/89 (25%), Gaps = 1/89 (1%)
Frame = +2
Query: 656 PTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPPXP-XXXXXXXPPKXPXGXXXXXPP 832
PT P G P P P PP P P PP P P
Sbjct: 945 PTKLTRPSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSP 1004
Query: 833 PXPPXKTPXPPXXXXXGXGXXXPSXXXPP 919
P + P P PS PP
Sbjct: 1005 AAPLARVPPVPKLSSKAPPVPLPSADAPP 1033
Score = 30.7 bits (66), Expect = 0.31
Identities = 28/115 (24%), Positives = 30/115 (26%), Gaps = 9/115 (7%)
Frame = +2
Query: 614 PXXKXPKTTAP---RGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPPXPXXXXX 784
P P +T P P+ P P P P P G PP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 785 XXPPKXPXGXXXXXP-----PPXPPXKTPXPPXXXXXG-XGXXXPSXXXPPGGGP 931
P P P PP P PP G PS PP P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 29.1 bits (62), Expect = 0.93
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = +2
Query: 704 PPPXTPRKXXPP-PPXGGXPPXPXXXXXXXPPKXPXGXXXXXPPPXPPXKTPXPPXXXXX 880
PP P PP P PP P PK G PPP P + P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSA-PPPVPAPSSEIPSIPAPS 1080
Query: 881 GXGXXXPSXXXPP 919
G PP
Sbjct: 1081 GAPPVPAPSGIPP 1093
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 707 PPXTPRKXXPPPPXGGXPPXPXXXXXXXP--PKXPXGXXXXXPPPXPPXKTPXPP 865
PP P+ PP PP P P P P G PPP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 759 PPXPXKXPGXPPRXXXX-GPXXXPPPPXPXXKPPPLPXXXXR 881
PP P P P GP PPPP P P +P R
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 704 PPPXTPRKXXPPPPXGGXPPXPXXXXXXXPPKXPXGXXXXXPPP 835
P P P PPPP PP P PP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSA--PPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 749 GGXPPXPXXXXXXXPPKXPXGXXXXXPPPXPPXKTPXPPXXXXXGXGXXXPSXXXPP 919
G P P P PP PP P PP G PS PP
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG--PPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 24/75 (32%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Frame = +2
Query: 704 PPPXTPRKXXPPP---PXGGXPPXPXXXXXXXPPKXPXGXXXXXPPPXPPXKTPXPPXXX 874
PPP P P P P PP P PP P G PPP P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP-GVAGAGPPPPP----PPPPAVS 786
Query: 875 XXGXGXXXPSXXXPP 919
G P+ P
Sbjct: 787 AGGSRYYAPAPQAEP 801
Score = 32.7 bits (71), Expect = 0.076
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 635 TTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPPXP 769
T AP P P P G PPP PPPP PP P
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP----PPPP 783
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.033
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = -1
Query: 880 RXXXXGRGGGFXXGXGG-GGXXXGPXXXFRGGXPGXXXGXGGXXXXXXXGVXFSGGXXGG 704
R G GGF G GG GG G RGG G G GG GG GG
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.076
Identities = 28/119 (23%), Positives = 31/119 (26%), Gaps = 13/119 (10%)
Frame = +2
Query: 608 GXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPP----XPXX 775
G P + ++ P P P PR PPP PP P
Sbjct: 108 GMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI 167
Query: 776 XXXXXPPKXPXGXXXXXP---------PPXPPXKTPXPPXXXXXGXGXXXPSXXXPPGG 925
PP P P PP PP P P PS PP G
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAG 226
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +2
Query: 704 PPPXTPRKXXPPPPXGGXPPXPXXXXXXXPPKXPXGXXXXXPPPXPPXKTPXPPXXXXXG 883
P P TP+ PP PP P PP P P PP + PP
Sbjct: 128 PAPPTPQSELRPPTSA--PPRPSI-----PPPSPASAPPI-PSKAPPIPSSLPPPAQPAA 179
Query: 884 XGXXXPSXXXPPGGGP 931
PS P P
Sbjct: 180 PVKSPPSAPSLPSAVP 195
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/89 (22%), Positives = 23/89 (25%)
Frame = +2
Query: 578 GGEXAPXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGX 757
G P P P++ G P PPP P + P P G
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Query: 758 PPXPXXXXXXXPPKXPXGXXXXXPPPXPP 844
PP P PP PP
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/75 (26%), Positives = 20/75 (26%), Gaps = 3/75 (4%)
Frame = +2
Query: 650 GXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPPXPXXXXXXXPPKXPXGXXXXXP 829
G P P PP TP P P P P P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 830 PPXP---PXKTPXPP 865
PP P P P PP
Sbjct: 457 PPLPAGMPAAPPLPP 471
Score = 29.5 bits (63), Expect = 0.71
Identities = 24/115 (20%), Positives = 27/115 (23%), Gaps = 5/115 (4%)
Frame = +2
Query: 590 APXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXP---PPPXG--G 754
AP P + P+ P P P PP PR P P
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS 288
Query: 755 XPPXPXXXXXXXPPKXPXGXXXXXPPPXPPXKTPXPPXXXXXGXGXXXPSXXXPP 919
PP P PPP P + P P PP
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.5 bits (63), Expect = 0.71
Identities = 27/99 (27%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Frame = +2
Query: 569 PPXGGEXAPXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPX 748
P G AP P +T+ P PTP P PP P P P
Sbjct: 393 PAIPGRSAPALP---PLGNASRTSTPP-VPTPPSLPPSA-------PPSLPPSAPPSLPM 441
Query: 749 GGXPPXPXXXXXXXPPKXPXGXXXXXP-PPXPPXKTPXP 862
G P P P G P PP P P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 9/60 (15%)
Frame = +2
Query: 704 PPPXTPRKXXPPPPXGG---------XPPXPXXXXXXXPPKXPXGXXXXXPPPXPPXKTP 856
PPP R+ PP G PP P P P G PPP PP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG--RSAPPPPPPRSAP 370
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/74 (22%), Positives = 18/74 (24%)
Frame = +2
Query: 644 PRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPPXPXXXXXXXPPKXPXGXXXX 823
P+G P P PP P P P PP
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 824 XPPPXPPXKTPXPP 865
P P PP P P
Sbjct: 415 PPVPTPPSLPPSAP 428
Score = 27.9 bits (59), Expect = 2.2
Identities = 28/103 (27%), Positives = 30/103 (29%), Gaps = 5/103 (4%)
Frame = +2
Query: 569 PPXGGEXAPXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPX--TPRKXXPP- 739
PP AP P + + P P P G PP R PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVS--NPPAP--PPAIPGRSAPALPPLGNASRTSTPPV 417
Query: 740 PPXGGXPPX-PXXXXXXXPPKXPXGXXXXXP-PPXPPXKTPXP 862
P PP P PP P G P PP P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 26.6 bits (56), Expect = 5.0
Identities = 21/95 (22%), Positives = 23/95 (24%), Gaps = 1/95 (1%)
Frame = +2
Query: 650 GXPTP-NXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPPXPXXXXXXXPPKXPXGXXXXX 826
G PT + P PP P P PP P P P
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMN 281
Query: 827 PPPXPPXKTPXPPXXXXXGXGXXXPSXXXPPGGGP 931
P K P PP + PP P
Sbjct: 282 PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 759 PPXPXKXPGXPPRXXXXGPXXXPPPPXPXXKPPPLP 866
PP P P PP PP P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.53
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 880 RXXXXGRGGGFXXGXGGGGXXXGPXXXFRGGXPGXXXGXGGXXXXXXXGVXFSGGXXGG 704
R GRGG G GG G RGG G G G F GG GG
Sbjct: 131 RNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 865 GRGGGFXXGXGGGGXXXGPXXXFRGGXPGXXXG 767
G GGG G GGG G FRGG G G
Sbjct: 161 GFGGGSRGGFGGGSRG-GSRGGFRGGSRGGFRG 192
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 9/63 (14%)
Frame = +2
Query: 704 PPPXTPRKXXP-----PPPXGGXPPXPXXXXXXXPPKXPXGXXXXX----PPPXPPXKTP 856
PP TP++ P PPP PP P PPP P + P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Query: 857 XPP 865
PP
Sbjct: 284 RPP 286
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/58 (24%), Positives = 18/58 (31%)
Frame = +2
Query: 572 PXGGEXAPXXXXGXPXXKXPKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPP 745
P + P P P++T P P+ G PPP P PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 629 PKTTAPRGXPTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPPXP 769
P+ PR P PN P PP P + P P G PP P
Sbjct: 99 PEEPLPREPPLPNE-PVPEEPLPGEPP--LPDEPVPEEPLPGEPPLP 142
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 22.6 bits (46), Expect(2) = 6.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 826 PPPPPPXXN 852
PPPPPP N
Sbjct: 308 PPPPPPPSN 316
Score = 21.8 bits (44), Expect(2) = 6.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 808 GXPXXXPPPPP 840
G P PPPPP
Sbjct: 304 GLPPPPPPPPP 314
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/54 (25%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +2
Query: 704 PPPXTPRKXXPPPPXGGXPPXPXXXXXXXPPKXPXGXXXXXP-PPXPPXKTPXP 862
PPP P++ PP PP P + P P P P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQPIVVAQP 259
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.6
Identities = 25/89 (28%), Positives = 26/89 (29%)
Frame = +2
Query: 656 PTPNXXPXXXGXXXXXPPPXTPRKXXPPPPXGGXPPXPXXXXXXXPPKXPXGXXXXXPPP 835
P+ N P G PP P PP G P P PP P G PP
Sbjct: 479 PSQNA-PFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMP-NLNMSQPPMVPPGMAL---PP 533
Query: 836 XPPXKTPXPPXXXXXGXGXXXPSXXXPPG 922
P P P P PPG
Sbjct: 534 GMPAPFPGYPAVPAM---PGIPGATAPPG 559
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,525,360
Number of Sequences: 5004
Number of extensions: 21566
Number of successful extensions: 326
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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