Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F01
         (893 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    31   0.012
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    26   0.46 
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    24   1.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 31.1 bits (67), Expect = 0.012
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 243  NRKCFREGESRRAPSAGPMLPVAAVTRRTSRTV 341
            N +C  +  S  APS  PM+P   VT  TSR +
Sbjct: 2281 NTECHPDASSTMAPSTTPMVPDKPVTTTTSRPI 2313


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 208 PSGT-PSMSPQKGSPASQPYTLNRN*TVAAVSSRRNSPHT 92
           PSG  P ++P  G P S PYT+  N   + +SS    P++
Sbjct: 110 PSGNVPPLTPSPGPP-SHPYTVISNGYSSPMSSGSYDPYS 148


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 72  VRCTRFCVCGEFLRLLTAATVQFLFNVYGCEAGDPFCGDIDGVPLGQRGVLPGSTQ 239
           V+C  + V  +FL +  AA     F   G  AG   C  +DG+   +   + GS +
Sbjct: 54  VKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGILERRSNDIAGSIE 109


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 72  VRCTRFCVCGEFLRLLTAATVQFLFNVYGCEAGDPFCGDIDGVPLGQRGVLPGSTQ 239
           V+C  + V  +FL +  AA     F   G  AG   C  +DG+   +   + GS +
Sbjct: 287 VKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGILERRSNDIAGSIE 342


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 72  VRCTRFCVCGEFLRLLTAATVQFLFNVYGCEAGDPFCGDIDGVPLGQRGVLPGSTQ 239
           V+C  + V  +FL +  AA     F   G  AG   C  +DG+   +   + GS +
Sbjct: 287 VKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGILERRSNDIAGSIE 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,609
Number of Sequences: 336
Number of extensions: 4260
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)