Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F01
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1236 - 10020837-10021041,10021746-10021831,10022552-100230...    31   1.6  
03_02_0493 - 8866685-8866888,8866989-8867059,8867143-8867416,886...    30   2.2  
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053...    30   2.2  
11_01_0471 - 3648871-3649078,3649841-3649926,3650111-3650155,365...    30   2.9  
09_04_0323 - 16679565-16679939,16680328-16680660,16680721-166810...    29   5.0  
11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084           29   6.6  

>01_01_1236 -
           10020837-10021041,10021746-10021831,10022552-10023061,
           10023914-10025965
          Length = 950

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 499 GCVRVVENDINAGSSHYIIGPFQNKSYETVVCCVEI 606
           G + V+ + +  G S Y+  P  N SY+ +V CV +
Sbjct: 590 GALLVMTSILQLGQSSYLPHPIDNDSYDRIVLCVRL 625


>03_02_0493 -
           8866685-8866888,8866989-8867059,8867143-8867416,
           8867666-8868036,8868127-8868482,8868558-8868630,
           8869307-8869412,8869667-8869760,8870616-8870680,
           8871655-8871927
          Length = 628

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 627 RTDKLSLYFHTTHDSLVAFVLKGSNYIMGTARID 526
           R DK S    T H SLV+  ++G+NY   + R+D
Sbjct: 267 RLDKTSGQSPTKHSSLVSKYIRGNNYASSSQRLD 300


>02_05_1074 -
           33904518-33904697,33904886-33904985,33905085-33905311,
           33905511-33908384,33908467-33908643,33908786-33909008,
           33909727-33909806,33910657-33910817,33910892-33910937,
           33911129-33911251,33911730-33911804,33911920-33912120
          Length = 1488

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 328 VRLVTAATGSMGPADGALLLSPSRKHFL 245
           VR V A + S+GP D  + L P  KHFL
Sbjct: 845 VRFVVACSESIGPVDTFVYLFPHLKHFL 872


>11_01_0471 -
           3648871-3649078,3649841-3649926,3650111-3650155,
           3650306-3650815,3651700-3653757
          Length = 968

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 499 GCVRVVENDINAGSSHYIIGPFQNKSYETVVCCVEI 606
           G + ++ + +  G S Y+  P  N SY+ +V CV +
Sbjct: 592 GALLIMVSILQLGQSSYLPHPIDNDSYDRIVLCVRL 627


>09_04_0323 -
           16679565-16679939,16680328-16680660,16680721-16681032,
           16683590-16683825,16683972-16684239
          Length = 507

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 22/56 (39%), Positives = 26/56 (46%)
 Frame = +3

Query: 201 PLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVAAVTRRTSRTVPHTYPSSVT 368
           PL    VL GS+   R   R    RR PS+ P  P AA +    R  PHT  S +T
Sbjct: 38  PLPPAAVL-GSSPAARTRLRP---RRRPSSAPHPPPAAASTSALRPRPHTQNSELT 89


>11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084
          Length = 197

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -2

Query: 379 SEFKVTDDG*VCGTVREVRLVTAAT-GSMGPADGALLLSPSRKHFLFICVEPGSTPR 212
           SE +VT DG    +V ++ +  A   G+ G   G   L PSR  +    + P   PR
Sbjct: 35  SEVRVTFDGLQLKSVTDLEVAAAGDLGAEGEGGGGCSLGPSRSRWSPTTLRPDLAPR 91


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,370,832
Number of Sequences: 37544
Number of extensions: 497425
Number of successful extensions: 1441
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)