Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_E23
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-9|CAJ76941.1|  331|Caenorhabditis elegans Hypothetical pr...    32   0.62 
Z29095-8|CAJ76940.1|  371|Caenorhabditis elegans Hypothetical pr...    32   0.62 
U80029-9|AAB37588.1|  459|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U29154-1|AAA68417.3|  444|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z29095-9|CAJ76941.1|  331|Caenorhabditis elegans Hypothetical
           protein R10E11.6b protein.
          Length = 331

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 12/26 (46%), Positives = 21/26 (80%)
 Frame = -1

Query: 551 VVRNITDSKLGKSYFLSLSKAYDVLD 474
           V++ I++++ G +YF SLSKA+D L+
Sbjct: 258 VIQEISETEKGSAYFKSLSKAFDTLE 283


>Z29095-8|CAJ76940.1|  371|Caenorhabditis elegans Hypothetical
           protein R10E11.6a protein.
          Length = 371

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 12/26 (46%), Positives = 21/26 (80%)
 Frame = -1

Query: 551 VVRNITDSKLGKSYFLSLSKAYDVLD 474
           V++ I++++ G +YF SLSKA+D L+
Sbjct: 258 VIQEISETEKGSAYFKSLSKAFDTLE 283


>U80029-9|AAB37588.1|  459|Caenorhabditis elegans Hypothetical
           protein T20D4.9 protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/77 (23%), Positives = 42/77 (54%)
 Frame = +2

Query: 44  FDTYREYREGVQNVNISFNYA*KINSINKENITHTTMYLSQHIYTHIYSVFIVKLLSLLK 223
           F+T+ EY   ++  N S  ++  + ++   N+T T ++     Y  +Y+   +++L+ L 
Sbjct: 78  FETHYEY---IKKKNNSEKFSFMVETLKNVNLTLTNIF-----YNSLYAN--IEVLNQLN 127

Query: 224 ICAQIENRLILFVFNII 274
           + A  EN+ +  +FN++
Sbjct: 128 LPASEENKFLHHIFNML 144


>U29154-1|AAA68417.3|  444|Caenorhabditis elegans Hypothetical
           protein T07F12.3 protein.
          Length = 444

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 560 ITLLGRANDVSDSSIEKTMCCLKRKRMFVNSVNGGI 667
           I  +G+  + SD  IEK   CL R   F N V   +
Sbjct: 199 IPFIGKIENKSDRRIEKVSVCLMRNTRFGNDVEDDV 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,241,028
Number of Sequences: 27780
Number of extensions: 369814
Number of successful extensions: 770
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)