Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_E23
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    24   1.6  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    24   1.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   6.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   6.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   6.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   6.5  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   6.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   8.5  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 392 NSTIIN*NYKFEHYYGSIVKDFYNFKPYSQI 300
           N+TI N NYK+ +   +   + YN K Y  I
Sbjct: 86  NNTIHNNNYKYNYNNNNYNNNNYNKKLYYNI 116


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 392 NSTIIN*NYKFEHYYGSIVKDFYNFKPYSQI 300
           N+TI N NYK+ +   +   + YN K Y  I
Sbjct: 86  NNTIHNNNYKYNYNNNNYNNNNYNKKLYYNI 116


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 392 NSTIIN*NYKFEHYYGSIVKD-FYNFKPYSQI 300
           N+TI N NYK+ +   +  K  +YN     QI
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYNINYIEQI 118


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 392 NSTIIN*NYKFEHYYGSIVKD-FYNFKPYSQI 300
           N+TI N NYK+ +   +  K  +YN     QI
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYNINYIEQI 118


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 392 NSTIIN*NYKFEHYYGSIVKD-FYNFKPYSQI 300
           N+TI N NYK+ +   +  K  +YN     QI
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYNINYIEQI 118


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 392 NSTIIN*NYKFEHYYGSIVKD-FYNFKPYSQI 300
           N+TI N NYK+ +   +  K  +YN     QI
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYNINYIEQI 118


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = -3

Query: 312 ILTDFAKTTHYRQMMLKTNNINLFSI*AQIFNNDKSLTINTEYM 181
           I++  +  T +       NN N ++     +NN K L  N  Y+
Sbjct: 81  IISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYI 124


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 719 C*HGCKSRAEVSFASHEIRSSLKTSVP*CYPHS 817
           C H     A +    H  R+SLKTS    YP S
Sbjct: 150 CLHHDIENAHIRRTLHMNRTSLKTSKIVSYPKS 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,218
Number of Sequences: 438
Number of extensions: 4964
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)