Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_E21
(897 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 198 2e-50
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 198 2e-50
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 198 2e-50
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 198 2e-50
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 149 1e-35
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 75 3e-13
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 198 bits (483), Expect = 2e-50
Identities = 98/155 (63%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Frame = +3
Query: 120 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPIRSRGGNTKYRALRLDTGNFSWGSECSTR 296
G +PY ++ G P T + T +R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 297 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 476
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 477 AIINKKRSQKTARKYLARQRLAKVEGALXEXSTRG 581
I+NKKRS+K +KY R++ AK+ L E +G
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 74 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 208
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 75.4 bits (177), Expect = 3e-13
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +2
Query: 578 GRLLACVASRPGQCGRADGYILXGKELEFYLXKIKSKRAK 697
G+LLAC+ASRPGQCGRADGY+L GKELEFYL KIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 198 bits (483), Expect = 2e-50
Identities = 98/155 (63%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Frame = +3
Query: 120 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPIRSRGGNTKYRALRLDTGNFSWGSECSTR 296
G +PY ++ G P T + T +R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 297 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 476
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 477 AIINKKRSQKTARKYLARQRLAKVEGALXEXSTRG 581
I+NKKRS+K +KY R++ AK+ L E +G
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 74 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 208
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 75.4 bits (177), Expect = 3e-13
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +2
Query: 578 GRLLACVASRPGQCGRADGYILXGKELEFYLXKIKSKRAK 697
G+LLAC+ASRPGQCGRADGY+L GKELEFYL KIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 198 bits (483), Expect = 2e-50
Identities = 98/155 (63%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Frame = +3
Query: 120 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPIRSRGGNTKYRALRLDTGNFSWGSECSTR 296
G +PY ++ G P T + T +R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 297 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 476
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 477 AIINKKRSQKTARKYLARQRLAKVEGALXEXSTRG 581
I+NKKRS+K +KY R++ AK+ L E +G
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 74 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 208
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 75.4 bits (177), Expect = 3e-13
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +2
Query: 578 GRLLACVASRPGQCGRADGYILXGKELEFYLXKIKSKRAK 697
G+LLAC+ASRPGQCGRADGY+L GKELEFYL KIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 198 bits (483), Expect = 2e-50
Identities = 98/155 (63%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Frame = +3
Query: 120 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPIRSRGGNTKYRALRLDTGNFSWGSECSTR 296
G +PY ++ G P T + T +R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 297 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 476
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 477 AIINKKRSQKTARKYLARQRLAKVEGALXEXSTRG 581
I+NKKRS+K +KY R++ AK+ L E +G
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 74 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 208
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 75.4 bits (177), Expect = 3e-13
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +2
Query: 578 GRLLACVASRPGQCGRADGYILXGKELEFYLXKIKSKRAK 697
G+LLAC+ASRPGQCGRADGY+L GKELEFYL KIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 149 bits (361), Expect = 1e-35
Identities = 76/118 (64%), Positives = 88/118 (74%)
Frame = +3
Query: 228 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 407
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 408 WYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEXSTRG 581
WYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L E +G
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 149
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 74 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 208
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 75.4 bits (177), Expect = 3e-13
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +2
Query: 578 GRLLACVASRPGQCGRADGYILXGKELEFYLXKIKSKRAK 697
G+LLAC+ASRPGQCGRADGY+L GKELEFYL KIK+++ K
Sbjct: 149 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 75.4 bits (177), Expect = 3e-13
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +2
Query: 578 GRLLACVASRPGQCGRADGYILXGKELEFYLXKIKSKRAK 697
G+LLAC+ASRPGQCGRADGY+L GKELEFYL KIK+++ K
Sbjct: 41 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 80
Score = 39.1 bits (87), Expect = 0.021
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 459 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEXSTRG 581
LT EE I+NKKRS+K +KY R++ AK+ L E +G
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,042,207
Number of Sequences: 237096
Number of extensions: 2268439
Number of successful extensions: 5214
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5214
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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