Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_E18
(1053 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 112 9e-26
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 54 3e-08
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 48 2e-06
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 44 3e-05
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 32 0.12
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 32 0.12
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 31 0.21
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 27 4.4
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 112 bits (269), Expect = 9e-26
Identities = 53/71 (74%), Positives = 59/71 (83%)
Frame = +3
Query: 243 AFSLFDKXXDGXITXXQQGTVMRSLXQNPTESELXDMINEVDADGNGTIDFPEFLTMMAR 422
AFSLFD+ DG IT + G VMRSL Q+PT +EL DMINEVDADGNGTIDF EFLTMMAR
Sbjct: 17 AFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMAR 76
Query: 423 MMKDTDSEEEI 455
MKDTD+EEE+
Sbjct: 77 KMKDTDNEEEV 87
Score = 59.7 bits (138), Expect = 7e-10
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXMIR 579
EAF+VFDKDGNG+I+ EL HV+T+LG +L+ EEV MIR
Sbjct: 89 EAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIR 128
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +3
Query: 243 AFSLFDKXXDGXITXXQQGTVMRSLXQNPTESELXDMINEVDADGNGTIDFPEF 404
AF +FDK +G IT + V+ SL + ++ E+ DMI E D DG+G I++ EF
Sbjct: 90 AFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143
Score = 34.7 bits (76), Expect = 0.022
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXMI 576
EAF +FD+D +G I++ EL VM +LG T E+ MI
Sbjct: 16 EAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMI 54
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 54.0 bits (124), Expect = 3e-08
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXMIRGGPL 591
+ F+VFDKD G I ELR+V+T+LG KL++EE+D +++G P+
Sbjct: 81 KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV 124
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 243 AFSLFDKXXDGXITXXQQGTVMRSLXQNPTESELXDMINEVDADGNGTIDFPEFLTMMAR 422
AFSLFD+ G I G ++R+ QNPT +E I E+++ +D +FL ++ R
Sbjct: 11 AFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQVLNR 66
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 48.4 bits (110), Expect = 2e-06
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +3
Query: 243 AFSLFDKXXDGXITXXQQGTVMRSLXQNPTESELXDMINEVDADGNGTIDFPEFLTMMAR 422
AF L+D DG I G+V+RSL N T++EL + NE+ ID +F++ ++
Sbjct: 14 AFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEKKFMSFVSN 69
Query: 423 MMKDTDSEEE 452
+++T+SEEE
Sbjct: 70 KLRETESEEE 79
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXMIR 579
+AFRVFDKD +G+I + M LG KL+D EV M++
Sbjct: 82 KAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQ 121
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEV 564
EAF ++D D +G I + V+ +LG +TD E+
Sbjct: 13 EAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAEL 47
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 243 AFSLFDKXXDGXITXXQQGTVMRSLXQNPTESELXDMINEVDADGNGTIDFPEFLTMMAR 422
AF LFD D I + MR+L N +SE+ ++ + D G G + +F+ +M
Sbjct: 42 AFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTE 101
Query: 423 MMKDTDSEEEI 455
+ + D EEI
Sbjct: 102 KIVERDPLEEI 112
Score = 33.5 bits (73), Expect = 0.051
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 463 AFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXMI 576
AF +FD D G IS LR V L + D+E++ MI
Sbjct: 115 AFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMI 152
Score = 29.9 bits (64), Expect = 0.63
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXMIR 579
EAF++FD D + I ELR M LG EV ++R
Sbjct: 41 EAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILR 80
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXM 573
EAF + DKDG+G I +++ ++T+L +++ ++ M
Sbjct: 52 EAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHM 89
Score = 29.9 bits (64), Expect = 0.63
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXMIR 579
EAF FD +G I +R ++++G ++ +EV+ ++R
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILR 160
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 460 EAFRVFDKDGNGFISAVELRHVMTNLGHKLTDEEVDXMI 576
EAF +FD G+I +LR LG LT E++ M+
Sbjct: 16 EAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML 54
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 31.5 bits (68), Expect = 0.21
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 312 SLXQNPTESELXDMINEVDADGNGTIDFPEFLTMMARMMKDTDSEEEI 455
S+ NP S L +++E DG G +DF EF+ ++ + EE++
Sbjct: 51 SVASNPLASRLFSVVDE---DGGGDVDFQEFINSLSVFSVHGNKEEKL 95
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 351 MINEVDADGNGTIDFPEFLTMMA 419
+ N DAD NG IDF EF+ ++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALS 90
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,300,315
Number of Sequences: 5004
Number of extensions: 28507
Number of successful extensions: 72
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 553220522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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