Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_E14
         (961 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    30   2.8  
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    29   6.5  
U97010-1|AAB52322.1|  334|Caenorhabditis elegans Hypothetical pr...    29   6.5  

>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 179 CCSRCPPCGANYTST--AVPGPACRPRADPTCD 271
           C S+C    A  T    A P P+C+P+  P C+
Sbjct: 655 CNSQCQTACATQTPAVQAAPAPSCQPQCQPACE 687


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +2

Query: 179 CCSRCPP-CGANYTSTAVP-GPACRPRADPTC 268
           C   C P C  NY +  +   PAC P   PTC
Sbjct: 370 CMPACSPTCVQNYAAGPIQCAPACMPLCQPTC 401


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
 Frame = +2

Query: 149 AAPHTAPMA*CCSRCPPCGANYT------STAVPGPACRPRADPTC 268
           AAP  AP   C   C P   ++T      +T  P P+C+P+  P C
Sbjct: 646 AAPSCAPQ--CQPACDPQCISFTLKLPVMTTPPPTPSCQPQCQPAC 689


>U97010-1|AAB52322.1|  334|Caenorhabditis elegans Hypothetical
           protein W08A12.4 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 489 AQVLQHQCFLEPPRPRAVQRGEH 421
           +Q+L+H+C +  PRP  ++  +H
Sbjct: 220 SQILEHRCLVSSPRPTDIEEWKH 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,741,305
Number of Sequences: 27780
Number of extensions: 208269
Number of successful extensions: 680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)