Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_E10
         (911 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033902-1|AAH33902.1|  971|Homo sapiens calsyntenin 1 protein.        32   3.3  
AB209804-1|BAD93041.1|  326|Homo sapiens CS0DF038YO05 variant pr...    31   4.4  

>BC033902-1|AAH33902.1|  971|Homo sapiens calsyntenin 1 protein.
          Length = 971

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = +1

Query: 532  KFIAILSRLLTDSISNEKKIKL--LSVMQDISYGIKISWQESYLTSLMKQLTDWIRXPMT 705
            KF  I S L    ISNE K+++  +     + +   ++ Q  ++    +   D     + 
Sbjct: 779  KFKLICSELNGRYISNEFKVEVNVIHTANPMEHANHMAAQPQFVHPEHRSFVDLSGHNLA 838

Query: 706  EPHHKAIGHKSLTVLVNVCYGNL 774
             PH  A+ H + TV++ VC  +L
Sbjct: 839  NPHPFAVVHSTATVVIVVCVSSL 861


>AB209804-1|BAD93041.1|  326|Homo sapiens CS0DF038YO05 variant
           protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 713 CGSVIGCLIQSVNCFIKLVRYDSCQLILIPYEISCIT 603
           CG    C + ++  F  LV + SC  + +P+ + C+T
Sbjct: 134 CGKCHVCTLSNIFSFSSLVFFISCDCLCVPFPLLCLT 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,853,072
Number of Sequences: 237096
Number of extensions: 2225897
Number of successful extensions: 7571
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7571
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)