Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_E10
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 34 0.16
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 34 0.16
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 34 0.16
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 34 0.16
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 34 0.16
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 34 0.16
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 33 0.37
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 31 1.5
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical pr... 29 4.6
U53180-8|AAA96290.1| 452|Caenorhabditis elegans Sulfatase domai... 29 6.1
AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical ... 29 6.1
Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical ... 28 8.1
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = -2
Query: 439 TLLSTKKLKNAQTSERPGENIVKSQEDAINPRYRVIKLSADSLCVASNSRAAVTKAFKFA 260
T+ S++ K Q +E + ++S E + YRV+ LS DS V S++ VTKA +
Sbjct: 4151 TVTSSQTTKIVQVTESEYKLEIESAEMSDTGAYRVV-LSTDSFSVESSATVTVTKAAEKI 4209
Query: 259 NLP 251
+LP
Sbjct: 4210 SLP 4212
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = -2
Query: 439 TLLSTKKLKNAQTSERPGENIVKSQEDAINPRYRVIKLSADSLCVASNSRAAVTKAFKFA 260
T+ S++ K Q +E + ++S E + YRV+ LS DS V S++ VTKA +
Sbjct: 3511 TVTSSQTTKIVQVTESEYKLEIESAEMSDTGAYRVV-LSTDSFSVESSATVTVTKAAEKI 3569
Query: 259 NLP 251
+LP
Sbjct: 3570 SLP 3572
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = -2
Query: 439 TLLSTKKLKNAQTSERPGENIVKSQEDAINPRYRVIKLSADSLCVASNSRAAVTKAFKFA 260
T+ S++ K Q +E + ++S E + YRV+ LS DS V S++ VTKA +
Sbjct: 4151 TVTSSQTTKIVQVTESEYKLEIESAEMSDTGAYRVV-LSTDSFSVESSATVTVTKAAEKI 4209
Query: 259 NLP 251
+LP
Sbjct: 4210 SLP 4212
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = -2
Query: 439 TLLSTKKLKNAQTSERPGENIVKSQEDAINPRYRVIKLSADSLCVASNSRAAVTKAFKFA 260
T+ S++ K Q +E + ++S E + YRV+ LS DS V S++ VTKA +
Sbjct: 4151 TVTSSQTTKIVQVTESEYKLEIESAEMSDTGAYRVV-LSTDSFSVESSATVTVTKAAEKI 4209
Query: 259 NLP 251
+LP
Sbjct: 4210 SLP 4212
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = -2
Query: 439 TLLSTKKLKNAQTSERPGENIVKSQEDAINPRYRVIKLSADSLCVASNSRAAVTKAFKFA 260
T+ S++ K Q +E + ++S E + YRV+ LS DS V S++ VTKA +
Sbjct: 3511 TVTSSQTTKIVQVTESEYKLEIESAEMSDTGAYRVV-LSTDSFSVESSATVTVTKAAEKI 3569
Query: 259 NLP 251
+LP
Sbjct: 3570 SLP 3572
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = -2
Query: 439 TLLSTKKLKNAQTSERPGENIVKSQEDAINPRYRVIKLSADSLCVASNSRAAVTKAFKFA 260
T+ S++ K Q +E + ++S E + YRV+ LS DS V S++ VTKA +
Sbjct: 4151 TVTSSQTTKIVQVTESEYKLEIESAEMSDTGAYRVV-LSTDSFSVESSATVTVTKAAEKI 4209
Query: 259 NLP 251
+LP
Sbjct: 4210 SLP 4212
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform b protein.
Length = 1321
Score = 32.7 bits (71), Expect = 0.37
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 240 NSDNGKFANLKAFVTAAREFEATHSESALNLMTRYLGLIASSCDL----TIFSPGRSEVC 407
N + K +L ++A + + +HS+S+L +L +S C + SP R+
Sbjct: 694 NMEKMKSQSLHPICSSADKMKQSHSDSSLYADYEHLEGSSSGCGAGASGSTLSPARASDS 753
Query: 408 AFFSFFVESNV*WARSSLGRSSSAVTCCSRAKREACTHPYIQIYSNIVTVVNRFNIK*EE 587
A +S E S LG SSS+ ++ K + Y I + + F+ K EE
Sbjct: 754 ATWSRIKERKR-TVGSDLGLSSSSHLRSTQYKEMCVMNNYFGIGLD-AKIALEFHNKREE 811
Query: 588 NKITICNAGYFIWY 629
++ T + F+WY
Sbjct: 812 SEKTRSRSKLFMWY 825
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = -1
Query: 746 TVSDL*PIALWCGSVIGCLIQSVNCFIKLVRYDSCQLILIPY-EISCITDSNFIFFSFD- 573
T+ + I LW + QSV +I ++R +C I+ ++ ++ S+ + F +
Sbjct: 10 TIFSIGAIVLWSIELFLAFAQSVRPWICILR--TCLYIIFHVTQVVFVSISHRVEFHYHR 67
Query: 572 -IESVNNRDNIAINLYVWVSACLA 504
I IA+NL++W S C+A
Sbjct: 68 MIVYFGLSHTIAVNLWIWASLCIA 91
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 442 HTLLSTKKLKNAQTSERPGENIV-KSQEDAINPRYRVIKLSADSLCVASNSRAAVTKAFK 266
H + + L QTS P ++V + Q+D Y KLS +SL +A S + K
Sbjct: 673 HPIFMRRFLNGTQTSPIPLTDLVCRQQDDQYVWFYEENKLSENSLYIALQSNEGACECPK 732
Query: 265 FANL 254
F N+
Sbjct: 733 FTNI 736
>Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical
protein F53B2.4 protein.
Length = 325
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 647 SCQLILIPYEISCITDSNFIFFS---FDIESVNNRDNIAINLYVWVSACL 507
SC+ +L PY+ I FI+F+ FDI+ +N + +NL +W+ C+
Sbjct: 177 SCRQLLGPYKFGSI----FIWFTGNWFDIKLING---LVLNLAIWLLLCI 219
>U53180-8|AAA96290.1| 452|Caenorhabditis elegans Sulfatase domain
protein protein 2 protein.
Length = 452
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 197 SENKYNLVTIKNLIKSYQMSIYXCSN 120
SE+K +LV +KN++ SY ++ C N
Sbjct: 386 SEHKSSLVKVKNVLGSYNKTLIPCCN 411
>AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical
protein C27A12.9 protein.
Length = 883
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 306 THSESALNLMTRYLGLIASSCDLTIFSPGRSEVCAFF 416
TH S NL L +I+ C + + G S +CA F
Sbjct: 656 THDVSRANLSAHSLSVISLICAVLAWREGNSAICAHF 692
>Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical
protein C53B4.3 protein.
Length = 415
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 501 KREACTHPYIQIYSNI-VTVVNRFNIK*EENKITICNAGYFIWYQNQLARI-ISDKFDE 671
K+ P+I I + + + ++ +FN EN+I G FI + N I + KFDE
Sbjct: 233 KKNGGVVPFIMIIAVLNLYIIEKFNATNTENQIMQMMMGVFIMFSNGFGVIWLRKKFDE 291
>AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical
protein Y76B12C.1 protein.
Length = 832
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 206 YGFSENKYNLVTIKNLIKSYQMSIYXCS 123
Y F + K+N++ I N + Y M+IY S
Sbjct: 445 YKFWDKKFNILQIGNFSREYSMTIYWSS 472
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,818,326
Number of Sequences: 27780
Number of extensions: 356840
Number of successful extensions: 928
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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