Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_E09
         (963 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.85 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.85
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 597 AKXXPPXXPPXPXGNPXTPLGGAXTXXP 514
           A+  P   PP P G P +PL G     P
Sbjct: 579 AQPPPAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
 Frame = -3

Query: 463 PQNPTXX--PXGXGGLXKXXKPPXPPPGP 383
           P NP     P G   L     PP PPP P
Sbjct: 561 PLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +3

Query: 756 PPXXGPPRGAXPXPAXXXFPGXXSPLPP 839
           P   GPPR   P       PG   P PP
Sbjct: 195 PGNVGPPRTGTPTQPQPPRPGGMYPQPP 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,294
Number of Sequences: 2352
Number of extensions: 5682
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)