Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_E09
(963 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein. 36 0.17
X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1 p... 33 2.1
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 32 2.7
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 32 2.7
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 32 2.7
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 32 2.7
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 32 2.7
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 32 2.7
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 32 2.7
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 32 2.7
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 4.7
X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich pro... 31 4.7
S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein. 31 4.7
S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor p... 31 4.7
S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-ri... 31 4.7
M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich pro... 31 4.7
K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein. 31 4.7
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 4.7
BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein. 31 4.7
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 4.7
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 4.7
X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich pro... 31 6.3
BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein. 31 6.3
BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein. 31 6.3
X57527-1|CAA40748.1| 744|Homo sapiens alpha 1(VIII) collagen pr... 31 8.3
K03208-1|AAA60189.1| 251|Homo sapiens PRB2 protein. 31 8.3
BT009917-1|AAP88919.1| 744|Homo sapiens collagen, type VIII, al... 31 8.3
BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein. 31 8.3
BC013581-1|AAH13581.1| 744|Homo sapiens collagen, type VIII, al... 31 8.3
AY550974-1|AAT52220.1| 745|Homo sapiens cell proliferation-indu... 31 8.3
>S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein.
Length = 382
Score = 36.3 bits (80), Expect = 0.17
Identities = 44/189 (23%), Positives = 52/189 (27%), Gaps = 7/189 (3%)
Frame = -3
Query: 781 PRGGPXXGGXXXEXLXXPSGXXR--PXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXXXXG 608
P+G P GG + P G + P + G G P GK P G
Sbjct: 2 PQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPP----PPPGKPQGPPPQGGNKPQG 57
Query: 607 GPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDXXXXXXXXXXXXXXPQNPTXXPXGXG 428
P K P P G+ P P PQ P P G
Sbjct: 58 PPPPGK-PQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP---PPQGG 113
Query: 427 GLXKXXKPPX-----PPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXX 263
+ PP PP G + S PP G + PP P P
Sbjct: 114 NKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ-GPPP 172
Query: 262 XAGGXPQXP 236
G PQ P
Sbjct: 173 QGGNKPQGP 181
Score = 30.7 bits (66), Expect = 8.3
Identities = 43/185 (23%), Positives = 51/185 (27%), Gaps = 2/185 (1%)
Frame = -3
Query: 781 PRGGPXXGGXXXEXLXXPSGXXR--PXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXXXXG 608
P+G P G + P G + P + G G P GK P G
Sbjct: 187 PQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPP----PPPGKPQGPPPQGGNKSQG 242
Query: 607 GPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDXXXXXXXXXXXXXXPQNPTXXPXGXG 428
P K G+ P P PQ P P G
Sbjct: 243 PPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP---PPQGG 299
Query: 427 GLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXXXAGGX 248
+ PP P GP GS PP G + PP P AGG
Sbjct: 300 NKPQGPPPPGKPQGPPPQGGSKSRSA--RSPP--GKPQ--GPPQQEGNNPQGPPPPAGGN 353
Query: 247 PQXPK 233
PQ P+
Sbjct: 354 PQQPQ 358
>X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1
protein.
Length = 309
Score = 32.7 bits (71), Expect = 2.1
Identities = 46/208 (22%), Positives = 55/208 (26%), Gaps = 4/208 (1%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRGGPXXGGXXXEXLXXPSGXXRPXEXGXXXXGXPGRG 668
P GG P G P+GG G P G +P + G G P R
Sbjct: 40 PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP-GKPEG--QPPQGGNQSQGPPPR- 95
Query: 667 AEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXG-RNXXPXPDXXXXX 491
GK P G P P P + P P
Sbjct: 96 ---PGKPEGPPPQGGNQSQGPPPRPGEPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQS 152
Query: 490 XXXXXXXXXPQNPTXXPXGX--GGLXKXXKPPXPPP-GPGXXKGSXVXXXXWXXPPMXGS 320
P+ P G + KP PPP G +G PP G
Sbjct: 153 QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGG 212
Query: 319 REXIAPPAXPNXAXFSPXXXAGGXPQXP 236
+ PP P SP G P+ P
Sbjct: 213 NQSQGPPPRPGKPEGSP-SQGGNKPRGP 239
Score = 31.1 bits (67), Expect = 6.3
Identities = 26/99 (26%), Positives = 28/99 (28%), Gaps = 4/99 (4%)
Frame = -1
Query: 822 GXPGXXXGXEXGXPPGGXXPXGEXAXNXXXXRXGXXGPXXXGXXXXXARXGGXXPREKPX 643
G P G PP P G + P G GG PR P
Sbjct: 185 GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP---PPRPGKPEGSPSQGGNKPRGPPP 241
Query: 642 XXXPFXGXGPXXALXAKXXPPXX----PPXPXGNPXTPL 538
G P + PP PP P GNP PL
Sbjct: 242 HPGKPQGPPPQEGNKPQRPPPPRRPQGPPPPGGNPQQPL 280
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 32.3 bits (70), Expect = 2.7
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -3
Query: 463 PQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNX 284
P P+ P G G P P GP + PP R APPA P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 283 A--XFSPXXXAGGXPQXP 236
A P + G P P
Sbjct: 322 ASPVMPPQTQSPGQPAQP 339
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 32.3 bits (70), Expect = 2.7
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -3
Query: 463 PQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNX 284
P P+ P G G P P GP + PP R APPA P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 283 A--XFSPXXXAGGXPQXP 236
A P + G P P
Sbjct: 322 ASPVMPPQTQSPGQPAQP 339
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 32.3 bits (70), Expect = 2.7
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -3
Query: 463 PQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNX 284
P P+ P G G P P GP + PP R APPA P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 283 A--XFSPXXXAGGXPQXP 236
A P + G P P
Sbjct: 322 ASPVMPPQTQSPGQPAQP 339
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 32.3 bits (70), Expect = 2.7
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -3
Query: 463 PQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNX 284
P P+ P G G P P GP + PP R APPA P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 283 A--XFSPXXXAGGXPQXP 236
A P + G P P
Sbjct: 322 ASPVMPPQTQSPGQPAQP 339
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 32.3 bits (70), Expect = 2.7
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -3
Query: 463 PQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNX 284
P P+ P G G P P GP + PP R APPA P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 283 A--XFSPXXXAGGXPQXP 236
A P + G P P
Sbjct: 322 ASPVMPPQTQSPGQPAQP 339
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 32.3 bits (70), Expect = 2.7
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -3
Query: 463 PQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNX 284
P P+ P G G P P GP + PP R APPA P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 283 A--XFSPXXXAGGXPQXP 236
A P + G P P
Sbjct: 322 ASPVMPPQTQSPGQPAQP 339
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 32.3 bits (70), Expect = 2.7
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -3
Query: 463 PQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNX 284
P P+ P G G P P GP + PP R APPA P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 283 A--XFSPXXXAGGXPQXP 236
A P + G P P
Sbjct: 322 ASPVMPPQTQSPGQPAQP 339
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 32.3 bits (70), Expect = 2.7
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -3
Query: 463 PQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNX 284
P P+ P G G P P GP + PP R APPA P
Sbjct: 219 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 278
Query: 283 A--XFSPXXXAGGXPQXP 236
A P + G P P
Sbjct: 279 ASPVMPPQTQSPGQPAQP 296
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.7
Identities = 39/187 (20%), Positives = 48/187 (25%)
Frame = -3
Query: 796 GXGXAPRGGPXXGGXXXEXLXXPSGXXRPXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXX 617
G G RGG G + P G G G PG+ G P
Sbjct: 13 GGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPG-PGQS----GPKPPIPPPPPHQ 67
Query: 616 XXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDXXXXXXXXXXXXXXPQNPTXXPX 437
P Q+ PP P + P P P + P
Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPA 127
Query: 436 GXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXXXA 257
PP PP G GS P + + PP P+ + A
Sbjct: 128 SSSA------PPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQA 181
Query: 256 GGXPQXP 236
GG P P
Sbjct: 182 GGPPPPP 188
>X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich
protein protein.
Length = 297
Score = 31.5 bits (68), Expect = 4.7
Identities = 48/210 (22%), Positives = 59/210 (28%), Gaps = 5/210 (2%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRG---GPXXGGXXXEXLXXPSGXXR--PXEXGXXXXG 683
P G+ + P G P G GP G + P G + P + G G
Sbjct: 78 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQPQG 137
Query: 682 XPGRGAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDX 503
P + +G P GP P P G+ P P
Sbjct: 138 PPPPPGKPQGP-----PQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPPQG 192
Query: 502 XXXXXXXXXXXXXPQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXG 323
PQ P P G + PP P GP GS PP G
Sbjct: 193 GNQPQGPPPPPGKPQGP---PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA--RAPP--G 245
Query: 322 SREXIAPPAXPNXAXFSPXXXAGGXPQXPK 233
+ PP P AGG PQ P+
Sbjct: 246 KPQ--GPPQQEGNNPQGPPPPAGGNPQQPQ 273
>S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein.
Length = 358
Score = 31.5 bits (68), Expect = 4.7
Identities = 48/210 (22%), Positives = 59/210 (28%), Gaps = 5/210 (2%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRG---GPXXGGXXXEXLXXPSGXXR--PXEXGXXXXG 683
P G+ + P G P G GP G + P G + P + G G
Sbjct: 139 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQPQG 198
Query: 682 XPGRGAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDX 503
P + +G P GP P P G+ P P
Sbjct: 199 PPPPPGKPQGP-----PQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPPQG 253
Query: 502 XXXXXXXXXXXXXPQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXG 323
PQ P P G + PP P GP GS PP G
Sbjct: 254 GNQPQGPPPPPGKPQGP---PPQGGNKPQGPPPPGKPQGPPPQGGSKSQSA--RAPP--G 306
Query: 322 SREXIAPPAXPNXAXFSPXXXAGGXPQXPK 233
+ PP P AGG PQ P+
Sbjct: 307 KPQ--GPPQQEGNNPQGPPPPAGGNPQQPQ 334
>S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor
protein.
Length = 297
Score = 31.5 bits (68), Expect = 4.7
Identities = 48/210 (22%), Positives = 59/210 (28%), Gaps = 5/210 (2%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRG---GPXXGGXXXEXLXXPSGXXR--PXEXGXXXXG 683
P G+ + P G P G GP G + P G + P + G G
Sbjct: 78 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQPQG 137
Query: 682 XPGRGAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDX 503
P + +G P GP P P G+ P P
Sbjct: 138 PPPPPGKPQGP-----PQQGGNRPQGPPPPGKPQGPPPQGDKSQSPQSPPGKPQGPPPQG 192
Query: 502 XXXXXXXXXXXXXPQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXG 323
PQ P P G + PP P GP GS PP G
Sbjct: 193 GNQPQGPPPPPGKPQGP---PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA--RAPP--G 245
Query: 322 SREXIAPPAXPNXAXFSPXXXAGGXPQXPK 233
+ PP P AGG PQ P+
Sbjct: 246 KPQ--GPPQQEGNNPQGPPPPAGGNPQQPQ 273
>S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-rich
protein protein.
Length = 331
Score = 31.5 bits (68), Expect = 4.7
Identities = 48/210 (22%), Positives = 59/210 (28%), Gaps = 5/210 (2%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRG---GPXXGGXXXEXLXXPSGXXR--PXEXGXXXXG 683
P G+ + P G P G GP G + P G + P + G G
Sbjct: 112 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQPQG 171
Query: 682 XPGRGAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDX 503
P + +G P GP P P G+ P P
Sbjct: 172 PPPPPGKPQGP-----PQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPPQG 226
Query: 502 XXXXXXXXXXXXXPQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXG 323
PQ P P G + PP P GP GS PP G
Sbjct: 227 GNQPQGPPPPPGKPQGP---PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA--RAPP--G 279
Query: 322 SREXIAPPAXPNXAXFSPXXXAGGXPQXPK 233
+ PP P AGG PQ P+
Sbjct: 280 KPQ--GPPQQEGNNPQGPPPPAGGNPQQPQ 307
>M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich
protein protein.
Length = 331
Score = 31.5 bits (68), Expect = 4.7
Identities = 48/210 (22%), Positives = 59/210 (28%), Gaps = 5/210 (2%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRG---GPXXGGXXXEXLXXPSGXXR--PXEXGXXXXG 683
P G+ + P G P G GP G + P G + P + G G
Sbjct: 112 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQPQG 171
Query: 682 XPGRGAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDX 503
P + +G P GP P P G+ P P
Sbjct: 172 PPPPPGKPQGP-----PQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPPQG 226
Query: 502 XXXXXXXXXXXXXPQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXG 323
PQ P P G + PP P GP GS PP G
Sbjct: 227 GNQPQGPPPPPGKPQGP---PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA--RAPP--G 279
Query: 322 SREXIAPPAXPNXAXFSPXXXAGGXPQXPK 233
+ PP P AGG PQ P+
Sbjct: 280 KPQ--GPPQQEGNNPQGPPPPAGGNPQQPQ 307
>K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein.
Length = 331
Score = 31.5 bits (68), Expect = 4.7
Identities = 48/210 (22%), Positives = 59/210 (28%), Gaps = 5/210 (2%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRG---GPXXGGXXXEXLXXPSGXXR--PXEXGXXXXG 683
P G+ + P G P G GP G + P G + P + G G
Sbjct: 112 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQPQG 171
Query: 682 XPGRGAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDX 503
P + +G P GP P P G+ P P
Sbjct: 172 PPPPPGKPQGP-----PQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPPQG 226
Query: 502 XXXXXXXXXXXXXPQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXG 323
PQ P P G + PP P GP GS PP G
Sbjct: 227 GNQPQGPPPPPGKPQGP---PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA--RAPP--G 279
Query: 322 SREXIAPPAXPNXAXFSPXXXAGGXPQXPK 233
+ PP P AGG PQ P+
Sbjct: 280 KPQ--GPPQQEGNNPQGPPPPAGGNPQQPQ 307
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.7
Identities = 39/187 (20%), Positives = 48/187 (25%)
Frame = -3
Query: 796 GXGXAPRGGPXXGGXXXEXLXXPSGXXRPXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXX 617
G G RGG G + P G G G PG+ G P
Sbjct: 13 GGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPG-PGQS----GPKPPIPPPPPHQ 67
Query: 616 XXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDXXXXXXXXXXXXXXPQNPTXXPX 437
P Q+ PP P + P P P + P
Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSTPPA 127
Query: 436 GXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXXXA 257
PP PP G GS P + + PP P+ + A
Sbjct: 128 SSSA------PPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQA 181
Query: 256 GGXPQXP 236
GG P P
Sbjct: 182 GGPPPPP 188
>BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein.
Length = 338
Score = 31.5 bits (68), Expect = 4.7
Identities = 48/210 (22%), Positives = 59/210 (28%), Gaps = 5/210 (2%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRG---GPXXGGXXXEXLXXPSGXXR--PXEXGXXXXG 683
P G+ + P G P G GP G + P G + P + G G
Sbjct: 119 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQPQG 178
Query: 682 XPGRGAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDX 503
P + +G P GP P P G+ P P
Sbjct: 179 PPPPPGKPQGP-----PQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPPQG 233
Query: 502 XXXXXXXXXXXXXPQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXG 323
PQ P P G + PP P GP GS PP G
Sbjct: 234 GNQPQGPPPPPGKPQGP---PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA--RAPP--G 286
Query: 322 SREXIAPPAXPNXAXFSPXXXAGGXPQXPK 233
+ PP P AGG PQ P+
Sbjct: 287 KPQ--GPPQQEGNNPQGPPPPAGGNPQQPQ 314
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 31.5 bits (68), Expect = 4.7
Identities = 39/187 (20%), Positives = 48/187 (25%)
Frame = -3
Query: 796 GXGXAPRGGPXXGGXXXEXLXXPSGXXRPXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXX 617
G G RGG G + P G G G PG+ G P
Sbjct: 13 GGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPG-PGQS----GPKPPIPPPPPHQ 67
Query: 616 XXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDXXXXXXXXXXXXXXPQNPTXXPX 437
P Q+ PP P + P P P + P
Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPA 127
Query: 436 GXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXXXA 257
PP PP G GS P + + PP P+ + A
Sbjct: 128 SSSA------PPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQA 181
Query: 256 GGXPQXP 236
GG P P
Sbjct: 182 GGPPPPP 188
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.7
Identities = 39/187 (20%), Positives = 48/187 (25%)
Frame = -3
Query: 796 GXGXAPRGGPXXGGXXXEXLXXPSGXXRPXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXX 617
G G RGG G + P G G G PG+ G P
Sbjct: 13 GGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPG-PGQS----GPKPPIPPPPPHQ 67
Query: 616 XXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDXXXXXXXXXXXXXXPQNPTXXPX 437
P Q+ PP P + P P P + P
Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPA 127
Query: 436 GXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXXXA 257
PP PP G GS P + + PP P+ + A
Sbjct: 128 SSSA------PPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQA 181
Query: 256 GGXPQXP 236
GG P P
Sbjct: 182 GGPPPPP 188
>X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich
protein protein.
Length = 236
Score = 31.1 bits (67), Expect = 6.3
Identities = 49/210 (23%), Positives = 57/210 (27%), Gaps = 5/210 (2%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRG---GPXXGGXXXEXLXXPSGXXR--PXEXGXXXXG 683
P G+ + P G P G GP G P G + P + G G
Sbjct: 17 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG 76
Query: 682 XPGRGAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDX 503
P GK P G P K P P + P P
Sbjct: 77 PP----PPPGKPQGPPPQGGNRPQGPPPPGK-PQGPPPQGDKSRSPRSPPRKPQGPPPQG 131
Query: 502 XXXXXXXXXXXXXPQNPTXXPXGXGGLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXG 323
PQ P P G + PP P GP GS PP G
Sbjct: 132 GNQPQGPPPPPGKPQGP---PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA--RSPP--G 184
Query: 322 SREXIAPPAXPNXAXFSPXXXAGGXPQXPK 233
+ PP P AGG PQ P+
Sbjct: 185 KPQ--GPPQQEGNNPQGPPPPAGGNPQQPQ 212
>BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 31.1 bits (67), Expect = 6.3
Identities = 41/188 (21%), Positives = 51/188 (27%), Gaps = 6/188 (3%)
Frame = -3
Query: 781 PRGGPXXGGXXXEXLXXPSGXXR--PXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXXXXG 608
P G P GG + G P + G G P R + +G+ P G
Sbjct: 57 PEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQP----PQGGNQSQG 112
Query: 607 GPXGQKXPPXXXPXSXXXXXXXXXXG-RNXXPXPDXXXXXXXXXXXXXXPQNPTXXPXGX 431
P P P + P P P+ P
Sbjct: 113 PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQ 172
Query: 430 --GGLXKXXKPPXPPP-GPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXXX 260
G + KP PPP G +G PP G + PP P SP
Sbjct: 173 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGSP-SQ 231
Query: 259 AGGXPQXP 236
G PQ P
Sbjct: 232 GGNKPQGP 239
>BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 31.1 bits (67), Expect = 6.3
Identities = 41/188 (21%), Positives = 51/188 (27%), Gaps = 6/188 (3%)
Frame = -3
Query: 781 PRGGPXXGGXXXEXLXXPSGXXR--PXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXXXXG 608
P G P GG + G P + G G P R + +G+ P G
Sbjct: 57 PEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQP----PQGGNQSQG 112
Query: 607 GPXGQKXPPXXXPXSXXXXXXXXXXG-RNXXPXPDXXXXXXXXXXXXXXPQNPTXXPXGX 431
P P P + P P P+ P
Sbjct: 113 PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQ 172
Query: 430 --GGLXKXXKPPXPPP-GPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXXX 260
G + KP PPP G +G PP G + PP P SP
Sbjct: 173 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGSP-SQ 231
Query: 259 AGGXPQXP 236
G PQ P
Sbjct: 232 GGNKPQGP 239
>X57527-1|CAA40748.1| 744|Homo sapiens alpha 1(VIII) collagen
protein.
Length = 744
Score = 30.7 bits (66), Expect = 8.3
Identities = 25/96 (26%), Positives = 28/96 (29%)
Frame = -1
Query: 822 GXPGXXXGXEXGXPPGGXXPXGEXAXNXXXXRXGXXGPXXXGXXXXXARXGGXXPREKPX 643
G PG PPG P GE G P G + G P+ +P
Sbjct: 498 GIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPG 557
Query: 642 XXXPFXGXGPXXALXAKXXPPXXPPXPXGNPXTPLG 535
P GP PP PP P LG
Sbjct: 558 LPGPPGPPGPPG--PPAVMPPTPPPQGEYLPDMGLG 591
>K03208-1|AAA60189.1| 251|Homo sapiens PRB2 protein.
Length = 251
Score = 30.7 bits (66), Expect = 8.3
Identities = 43/185 (23%), Positives = 51/185 (27%), Gaps = 2/185 (1%)
Frame = -3
Query: 781 PRGGPXXGGXXXEXLXXPSGXXR--PXEXGXXXXGXPGRGAEXKGKTXXXXPLXRXXXXG 608
P+G P G + P G + P + G G P GK P G
Sbjct: 56 PQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPP----PPPGKPQGPPPQGDNKSQG 111
Query: 607 GPXGQKXPPXXXPXSXXXXXXXXXXGRNXXPXPDXXXXXXXXXXXXXXPQNPTXXPXGXG 428
P K G+ P P PQ P P G
Sbjct: 112 PPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP---PPQGG 168
Query: 427 GLXKXXKPPXPPPGPGXXKGSXVXXXXWXXPPMXGSREXIAPPAXPNXAXFSPXXXAGGX 248
+ PP P GP GS PP G + PP P AGG
Sbjct: 169 NKPQGPPPPGKPQGPPPQGGSKSRSA--RSPP--GKPQ--GPPQQEGNNPQGPPPPAGGN 222
Query: 247 PQXPK 233
PQ P+
Sbjct: 223 PQQPQ 227
>BT009917-1|AAP88919.1| 744|Homo sapiens collagen, type VIII, alpha
1 protein.
Length = 744
Score = 30.7 bits (66), Expect = 8.3
Identities = 25/96 (26%), Positives = 28/96 (29%)
Frame = -1
Query: 822 GXPGXXXGXEXGXPPGGXXPXGEXAXNXXXXRXGXXGPXXXGXXXXXARXGGXXPREKPX 643
G PG PPG P GE G P G + G P+ +P
Sbjct: 498 GIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPG 557
Query: 642 XXXPFXGXGPXXALXAKXXPPXXPPXPXGNPXTPLG 535
P GP PP PP P LG
Sbjct: 558 LPGPPGPPGPPG--PPAVMPPTPPPQGEYLPDMGLG 591
>BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 30.7 bits (66), Expect = 8.3
Identities = 49/218 (22%), Positives = 57/218 (26%), Gaps = 12/218 (5%)
Frame = -3
Query: 847 PRXGGRGEXXPGXXXXAGXGXAPRGGPXXGGXXXEXLXXPSGXXRPXEXGXXXXGXPGR- 671
P GG P G P+GG G P G P + G G P R
Sbjct: 82 PPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRP-GKPEGP--PPQGGNQSQGPPPRP 138
Query: 670 ----GAEXKGKTXXXXPLXRXXXXGGPXGQKXPPXXXPX---SXXXXXXXXXXGRNXXPX 512
G +G P R GP Q P ++ P
Sbjct: 139 GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPP 198
Query: 511 PDXXXXXXXXXXXXXXPQNPTXXPXGXGGLXKXX--KPPXPPPGPGXXKGSXVXXXXW-X 341
P Q P P G KP PPP PG +G
Sbjct: 199 PRPGKPEGPPPQGGNQSQGPPPRPGKPEGSPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQ 258
Query: 340 XPPMXGSREXIAPP-AXPNXAXFSPXXXAGGXPQXPKG 230
PP G + PP P P G P P+G
Sbjct: 259 RPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQG 296
>BC013581-1|AAH13581.1| 744|Homo sapiens collagen, type VIII, alpha
1 protein.
Length = 744
Score = 30.7 bits (66), Expect = 8.3
Identities = 25/96 (26%), Positives = 28/96 (29%)
Frame = -1
Query: 822 GXPGXXXGXEXGXPPGGXXPXGEXAXNXXXXRXGXXGPXXXGXXXXXARXGGXXPREKPX 643
G PG PPG P GE G P G + G P+ +P
Sbjct: 498 GIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPG 557
Query: 642 XXXPFXGXGPXXALXAKXXPPXXPPXPXGNPXTPLG 535
P GP PP PP P LG
Sbjct: 558 LPGPPGPPGPPG--PPAVMPPTPPPQGEYLPDMGLG 591
>AY550974-1|AAT52220.1| 745|Homo sapiens cell
proliferation-inducing protein 41 protein.
Length = 745
Score = 30.7 bits (66), Expect = 8.3
Identities = 25/96 (26%), Positives = 28/96 (29%)
Frame = -1
Query: 822 GXPGXXXGXEXGXPPGGXXPXGEXAXNXXXXRXGXXGPXXXGXXXXXARXGGXXPREKPX 643
G PG PPG P GE G P G + G P+ +P
Sbjct: 499 GIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPG 558
Query: 642 XXXPFXGXGPXXALXAKXXPPXXPPXPXGNPXTPLG 535
P GP PP PP P LG
Sbjct: 559 LPGPPGPPGPPG--PPAVMPPTPPPQGEYLPDMGLG 592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,392,340
Number of Sequences: 237096
Number of extensions: 1672226
Number of successful extensions: 7209
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6699
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12769697060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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