Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_E04
         (921 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         28   0.46 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         28   0.46 
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    24   7.5  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   9.8  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 307 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATL 474
           DR      Y++ K  +K A +  +RP  A +   L ++K     N Y T+  + TL
Sbjct: 476 DRPSSGPRYRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTL 531


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 307 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATL 474
           DR      Y++ K  +K A +  +RP  A +   L ++K     N Y T+  + TL
Sbjct: 476 DRPSSGPRYRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTL 531


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 463 CISLCGSG*PLTTSSLCTVTS 401
           C S CGSG P  T   C   S
Sbjct: 12  CTSGCGSGQPCATDCKCACAS 32


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 455 SVR*WLAFNNLFTLYSDLLAPALN 384
           +V+ WLA NN+ T+    L+P LN
Sbjct: 163 TVQTWLADNNVKTMKWPALSPDLN 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,883
Number of Sequences: 2352
Number of extensions: 11391
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)