Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_E03
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0038 - 15778446-15778577,15778685-15779020,15779106-157792...    31   0.95 
02_03_0202 + 16359539-16359763,16360113-16360193,16361362-163616...    29   6.7  
09_04_0461 + 17781413-17781474,17781576-17781629,17781729-177818...    28   8.8  

>06_03_0038 -
           15778446-15778577,15778685-15779020,15779106-15779225,
           15779280-15779765,15779861-15779994,15780111-15780230,
           15784881-15785018,15785404-15786079,15786179-15786340,
           15786424-15786618,15786839-15787084,15787758-15787952
          Length = 979

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 531 LALTDKSDMNGFPQFVCYMCAIDLHKCCQFIEKCLLTQATLLDVFAHNGEV 683
           L L+D +    F  F+   C + +H C   I   LLTQ+ +L    H  EV
Sbjct: 679 LILSDPTQFGRFVPFLPIACTLQIHNCFILILPHLLTQSNILPHSPHLVEV 729


>02_03_0202 +
           16359539-16359763,16360113-16360193,16361362-16361600,
           16361828-16362029,16362108-16362188,16362272-16362455,
           16362625-16362791,16363020-16363802
          Length = 653

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = +3

Query: 228 SIIAFHKFPANSVLRAKCLNAIGRPNWDPPSYTRICSEHFDHFINETNGTDQKNDTLLMK 407
           S+   H   +  VLR +  +A+  P WDP + +R    +  H I E     Q  D + +K
Sbjct: 150 SLYKLHLKTSPLVLRDEVRSAVP-PKWDPAALSRFIKTYGTHIIVEMAVGGQ--DVICVK 206

Query: 408 DIPSVT 425
             PS T
Sbjct: 207 QSPSST 212


>09_04_0461 +
           17781413-17781474,17781576-17781629,17781729-17781839,
           17781921-17781991,17782256-17782449,17783019-17783096
          Length = 189

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 648 TLLDVFAHNGEVTEKLIKNVDRKQLKLXKSLSIHKQTCVIEY 773
           T L+V  H  EVTEKL  NV      L ++ ++HK    +EY
Sbjct: 108 TALEVVEHAAEVTEKLAANVAN---ALPENGTLHKLAEEVEY 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,240,778
Number of Sequences: 37544
Number of extensions: 346166
Number of successful extensions: 771
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)