Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_E02
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           36   0.051
03_05_0170 + 21482962-21483018,21483133-21483183,21483313-214835...    29   3.4  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   7.8  

>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -1

Query: 780 PPGXXPXKKKKKGXGXXXPXPPXXFXXXGGGGPPPP 673
           PP   P   +  G G   P PP      GGGGPPPP
Sbjct: 353 PPPAAPAAPRPPGPGPGPPPPPGA-AGRGGGGPPPP 387


>03_05_0170 +
           21482962-21483018,21483133-21483183,21483313-21483500,
           21483587-21483671,21483848-21483902,21483998-21484041,
           21485045-21485113,21485207-21485307,21485396-21485452,
           21485540-21485636
          Length = 267

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -1

Query: 147 KGFYDLVTETFKSCLILIFIHI 82
           KG  DLVTET K+C  LIF H+
Sbjct: 34  KGQVDLVTETDKACEDLIFNHL 55


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 740  GGXXXPPHPXXXXXXGGXXPPPP 672
            GG   PP P      GG  PPPP
Sbjct: 1131 GGHQAPPAPPLPEGIGGVPPPPP 1153


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,421,000
Number of Sequences: 37544
Number of extensions: 237029
Number of successful extensions: 372
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)