Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D24
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    25   2.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   3.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   9.2  

>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -1

Query: 151 LNKRLVLRGNFIGNGQ*MWSPDGREHLCDF 62
           LN +LV R NFI N     SPDG   + DF
Sbjct: 231 LNNQLVGRPNFIINYCGSASPDGYAKVSDF 260


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 456 LNMMSSDNYEDDLKSVQLHFPSERR 530
           +++M SD+ +DD+ S+ +H P   R
Sbjct: 810 VSVMRSDDEDDDIGSLDMHRPEGNR 834


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 636 ISNYSSFAAVPSYGKRGYRRGKSAPSPP 553
           + N  S + +PSY ++  ++ +SA +PP
Sbjct: 370 VHNAKSVSPLPSYTQQQQQQQQSAAAPP 397


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 645 KVMISNYSSFAAVPSYGKRGYRRGKSAPSPP 553
           ++++S  S+ A  P  G R  R+G  A SPP
Sbjct: 823 RIVVSK-SANAMHPPRGSRHTRQGSEASSPP 852


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,478
Number of Sequences: 2352
Number of extensions: 16807
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)