Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D24
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical ...    55   8e-08
U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astaci...    31   1.1  
Z68135-1|CAA92227.1|  325|Caenorhabditis elegans Hypothetical pr...    29   3.3  

>AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical
           protein Y48G10A.3 protein.
          Length = 343

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 25/65 (38%), Positives = 36/65 (55%)
 Frame = +1

Query: 583 ISSFAVRGDRSKRAIITYHDLGLXXXXXXXXXXXXVDMRSILEQFCIYHVNAPGQEEGSP 762
           +S +  R D  K  ++T+HDLGL            V +    ++FCIY+VNAPGQE  + 
Sbjct: 38  VSIYGDRNDPKKVPMVTFHDLGLDSESNFQNFFQFVSIAEFADKFCIYNVNAPGQEMDAQ 97

Query: 763 TLPED 777
            LPE+
Sbjct: 98  PLPEN 102


>U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astacin
           protease protein39 protein.
          Length = 951

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +1

Query: 691 DMRSILEQFCIYHVNAPGQEEGSPTLPEDSPILAWTLWRFRST 819
           D  +  E  C + VNAP  +  SP  P D P      W F +T
Sbjct: 683 DKHNCKEGSCFFEVNAPAGDINSPNYPNDYPKGQNCSWHFVTT 725


>Z68135-1|CAA92227.1|  325|Caenorhabditis elegans Hypothetical
           protein ZK1073.1 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +1

Query: 616 KRAIITYHDLGLXXXXXXXXXXXXVDMRSILEQFCIYHVNAPGQEEGSPTLPEDSPIL 789
           K  I+T HD+G               M ++ E+    HV  PGQE+ S     D P L
Sbjct: 33  KTIILTVHDIGTNHKSFVRFVNHP-SMATVKEKAIFLHVCVPGQEDNSADFFGDFPTL 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,403,990
Number of Sequences: 27780
Number of extensions: 376250
Number of successful extensions: 953
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)