Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D23
(892 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 118 8e-27
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 118 8e-27
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 118 8e-27
BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p pro... 38 0.019
AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-P... 38 0.019
BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p pro... 36 0.057
AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA ... 36 0.057
BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p pro... 33 0.53
AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-P... 33 0.53
AE013599-3518|AAN16119.1| 281|Drosophila melanogaster CG32834-P... 31 1.6
AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p pro... 29 8.6
AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA ... 29 8.6
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 118 bits (285), Expect = 8e-27
Identities = 65/121 (53%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Frame = +1
Query: 238 TFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI--X 411
TFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK +REEKR LGFVLLRGENIVSLT+
Sbjct: 26 TFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGP 85
Query: 412 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVGGPSQQHMAPGNR 591
RGVGGP+QQHMAP R
Sbjct: 86 PPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGR 145
Query: 592 G 594
G
Sbjct: 146 G 146
Score = 52.4 bits (120), Expect = 8e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 162 MTIGKNNKMQQHINYRVRVILQDSRYIYWNF*SF 263
MTIGKNNKM QH+NYRVR++LQDSR F +F
Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAF 34
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 118 bits (285), Expect = 8e-27
Identities = 65/121 (53%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Frame = +1
Query: 238 TFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI--X 411
TFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK +REEKR LGFVLLRGENIVSLT+
Sbjct: 26 TFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGP 85
Query: 412 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVGGPSQQHMAPGNR 591
RGVGGP+QQHMAP R
Sbjct: 86 PPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGR 145
Query: 592 G 594
G
Sbjct: 146 G 146
Score = 52.4 bits (120), Expect = 8e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 162 MTIGKNNKMQQHINYRVRVILQDSRYIYWNF*SF 263
MTIGKNNKM QH+NYRVR++LQDSR F +F
Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAF 34
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 118 bits (285), Expect = 8e-27
Identities = 65/121 (53%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Frame = +1
Query: 238 TFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI--X 411
TFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK +REEKR LGFVLLRGENIVSLT+
Sbjct: 26 TFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGP 85
Query: 412 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVGGPSQQHMAPGNR 591
RGVGGP+QQHMAP R
Sbjct: 86 PPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGR 145
Query: 592 G 594
G
Sbjct: 146 G 146
Score = 52.4 bits (120), Expect = 8e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 162 MTIGKNNKMQQHINYRVRVILQDSRYIYWNF*SF 263
MTIGKNNKM QH+NYRVR++LQDSR F +F
Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAF 34
>BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p
protein.
Length = 103
Score = 37.9 bits (84), Expect = 0.019
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +1
Query: 247 GTFKAFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGFVLLRGENIV 396
G AFD+H+N++LGD EE +I + + + KRT+ + +RG+ ++
Sbjct: 42 GRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVI 94
>AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-PA
protein.
Length = 103
Score = 37.9 bits (84), Expect = 0.019
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +1
Query: 247 GTFKAFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGFVLLRGENIV 396
G AFD+H+N++LGD EE +I + + + KRT+ + +RG+ ++
Sbjct: 42 GRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVI 94
>BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p
protein.
Length = 95
Score = 36.3 bits (80), Expect = 0.057
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 241 FIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENI 393
FIGT K FD+ +N+I+ +C E + T E+ LG ++RG+NI
Sbjct: 22 FIGTLKGFDQTINIIIDECHE------RVFSTTSGIEQIVLGLHIIRGDNI 66
>AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA
protein.
Length = 95
Score = 36.3 bits (80), Expect = 0.057
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 241 FIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENI 393
FIGT K FD+ +N+I+ +C E + T E+ LG ++RG+NI
Sbjct: 22 FIGTLKGFDQTINIIIDECHE------RVFSTTSGIEQIVLGLHIIRGDNI 66
>BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p
protein.
Length = 94
Score = 33.1 bits (72), Expect = 0.53
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 217 LYYKTLXTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENI 393
LY G FD++MNL+L D EE +K++ ++R LG ++L+G+NI
Sbjct: 34 LYENISLRIEGHIVGFDEYMNLVLDDAEEV-YVKTR--------QRRNLGRIMLKGDNI 83
>AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-PA
protein.
Length = 94
Score = 33.1 bits (72), Expect = 0.53
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 217 LYYKTLXTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENI 393
LY G FD++MNL+L D EE +K++ ++R LG ++L+G+NI
Sbjct: 34 LYENISLRIEGHIVGFDEYMNLVLDDAEEV-YVKTR--------QRRNLGRIMLKGDNI 83
>AE013599-3518|AAN16119.1| 281|Drosophila melanogaster CG32834-PA
protein.
Length = 281
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 627 PHDG-WPSSRNDGSSSWHGSWWAR 695
P DG W + GS+SW GSWW R
Sbjct: 138 PDDGSWCTVSGWGSTSWWGSWWDR 161
>AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p
protein.
Length = 119
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 244 IGTFKAFDKHMNLILGDCEEF-----RKIKSKNSKTADREEKRTLGFVLLRGENIV 396
+G KAFD+H N++L + +E R K K K + R + + LRG++++
Sbjct: 52 LGRVKAFDRHCNMVLENVKEMWTELPRTGKGK-KKVKPVNKDRFISKMFLRGDSVI 106
>AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA
protein.
Length = 119
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 244 IGTFKAFDKHMNLILGDCEEF-----RKIKSKNSKTADREEKRTLGFVLLRGENIV 396
+G KAFD+H N++L + +E R K K K + R + + LRG++++
Sbjct: 52 LGRVKAFDRHCNMVLENVKEMWTELPRTGKGK-KKVKPVNKDRFISKMFLRGDSVI 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,140,083
Number of Sequences: 53049
Number of extensions: 547853
Number of successful extensions: 1373
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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