Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D23
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical pr...    85   8e-17
Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical pr...    36   0.039
AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical ...    36   0.051
Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF067208-1|AAC16975.1|  298|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF038608-14|AAT92087.1|  314|Caenorhabditis elegans Serpentine r...    28   7.8  
AC084197-12|AAL00875.1|   98|Caenorhabditis elegans Lsm sm-like ...    28   7.8  

>Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical
           protein W08E3.1 protein.
          Length = 160

 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = +1

Query: 238 TFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI 408
           TFIG FKAFDKHMN++L +CEE R+IK K  K  D EEKR LG VL+RGE+IVS+T+
Sbjct: 26  TFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTDGEEKRILGLVLVRGEHIVSMTV 82



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +3

Query: 162 MTIGKNNKMQQHINYRVRVILQDSRYIYWNF*SF 263
           MTI KNNKM  H+NYR+++ILQD R     F +F
Sbjct: 1   MTISKNNKMMAHLNYRMKIILQDGRTFIGFFKAF 34


>Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical
           protein ZK593.7 protein.
          Length = 104

 Score = 35.9 bits (79), Expect = 0.039
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 247 GTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENI 393
           G  + FD+ +N++L DC E+ +     S   D  E R LG ++ RG  I
Sbjct: 36  GVLRGFDQLLNMVLDDCREYLRDPQNPSVVGD--ETRQLGLIVARGTAI 82


>AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical
           protein Y62E10A.12 protein.
          Length = 102

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = +1

Query: 247 GTFKAFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGFVLLRGENIV 396
           G  +AFD+H+N++L + EE    R++     +   ++ KR +  + +RG++++
Sbjct: 41  GRLRAFDQHLNMVLSEVEETITTREVDEDTFEEIYKQTKRVVPMLFVRGDSVI 93


>Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical
           protein F28F8.3 protein.
          Length = 91

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 244 IGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSL 402
           +GT   FD ++N++L D  E+         TAD +    L  +LL G +I  L
Sbjct: 37  VGTLTGFDDYVNMVLEDVVEY-------ENTADGKRMTKLDTILLNGNHITML 82


>Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical
           protein C52E4.3 protein.
          Length = 118

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 244 IGTFKAFDKHMNLILGDCEEF----RKIKSKNSKTADREEKRTLGFVLLRGENIV 396
           +G  KAFD+H N++L + +E      K      K     + R +  + LRG++++
Sbjct: 53  LGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVI 107


>AF067208-1|AAC16975.1|  298|Caenorhabditis elegans Hypothetical
           protein C46F2.1 protein.
          Length = 298

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 891 FKSVVXYFDLTHFTRQHVHHSTNFMFHTQNQRI 793
           FK VV + +    T  H HHS +   H ++Q++
Sbjct: 232 FKKVVPHINTKKHTTHHKHHSNHSTMHHESQKL 264


>AF038608-14|AAT92087.1|  314|Caenorhabditis elegans Serpentine
           receptor, class z protein83 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = -3

Query: 206 IINMLLHLIVFADRHFIGVIRKILLDIWKASICFSDIHLTVAF 78
           I++ LLH+I     H I +IR +++ I+ A +CF+  HLT AF
Sbjct: 79  ILHTLLHVI-----HEIVIIRFLIVVIFYA-LCFTMYHLTKAF 115


>AC084197-12|AAL00875.1|   98|Caenorhabditis elegans Lsm sm-like
           protein protein 8 protein.
          Length = 98

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 244 IGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENI 393
           +G  K FD+ +NL++ D  E    +++   T        LG  ++RGEN+
Sbjct: 24  VGLLKGFDQLINLVIEDAHERSYSETEGVLTT------PLGLYIIRGENV 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,391,465
Number of Sequences: 27780
Number of extensions: 297866
Number of successful extensions: 795
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)