Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D22
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyc... 177 1e-45
SPBC3H7.04 |||mitochondrial ribosomal protein subunit S26|Schizo... 46 9e-06
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 33 0.053
SPBC16A3.14 |||mitochondrial ribosomal protein subunit S26|Schiz... 30 0.37
SPBC12C2.04 |||NAD binding dehydrogenase family protein|Schizosa... 30 0.49
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 28 1.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 3.5
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 26 6.1
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 26 8.1
>SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 218
Score = 177 bits (432), Expect = 1e-45
Identities = 89/185 (48%), Positives = 116/185 (62%), Gaps = 5/185 (2%)
Frame = +1
Query: 181 IRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 360
+ +A K TLP LPY YNALEP +S IM LHH KHH TY+NNLN A+EKLA
Sbjct: 16 VSIARGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQEKLADPNL- 74
Query: 361 GDIDTIINLAPALKFNGGGHINHSIFWHNLSP---NGGKP--SDVLTKAVEKDFGSWDNL 525
D++ + L A+KFNGGGHINHS+FW L+P GGKP S L KA+ +GS ++
Sbjct: 75 -DLEGEVALQAAIKFNGGGHINHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSLEDF 133
Query: 526 KNQLSTASVAVQGSGWGWLGYNKQMKXLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYL 705
+ +++ A ++QGSGW WL +K L+I T NQD + + P+ GID WEHAYY
Sbjct: 134 QKEMNAALASIQGSGWAWLIVDKD-GSLRITTTANQDTIVKSK---PIIGIDAWEHAYYP 189
Query: 706 QXQER 720
Q + R
Sbjct: 190 QYENR 194
Score = 33.5 bits (73), Expect = 0.040
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 710 YKNVRADYVKAIFDVANWNDXSQRY 784
Y+N +A+Y KAI++V NW + RY
Sbjct: 191 YENRKAEYFKAIWNVINWKEAESRY 215
>SPBC3H7.04 |||mitochondrial ribosomal protein subunit
S26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 220
Score = 45.6 bits (103), Expect = 9e-06
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Frame = +1
Query: 421 INHSIFWHNL-SPNG-GKPSDV----LTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWL 582
+NH F+ L SP +D+ L ++ FGS+ LK+Q+ +V G GW WL
Sbjct: 76 VNHDFFFSGLISPERPSADADLGAINLKPGIDASFGSFGELKSQMVDVGNSVFGDGWLWL 135
Query: 583 GYNKQMKXLQIATCQNQD---------PLQATTGLVPLFGIDVWEHAY 699
Y+ + + N P T +VPL +++W++AY
Sbjct: 136 VYSPEKSLFSLLCTYNASNAFLWGTGFPKFRTNAIVPLLCVNLWQYAY 183
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 33.1 bits (72), Expect = 0.053
Identities = 32/110 (29%), Positives = 47/110 (42%)
Frame = +1
Query: 202 RQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTII 381
RQKHT P P +A S HH HH+ N L EK K + ++
Sbjct: 97 RQKHTAPATPIPVSA----------SRHHKPHHSGLKNLL----EKAMHPGHKSNANSPT 142
Query: 382 NLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKN 531
+ +P+ F G IN+ I N S + P + + + K S+ +LKN
Sbjct: 143 SESPSKGF--GSFINNHILHKNTSSHPSSPVNGKSSDIHKS-QSYQHLKN 189
>SPBC16A3.14 |||mitochondrial ribosomal protein subunit
S26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 277
Score = 30.3 bits (65), Expect = 0.37
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 13/156 (8%)
Frame = +1
Query: 211 HTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKGDIDTIIN 384
HT+P L + N L P+ S E + + +H + LN V +L + I
Sbjct: 39 HTVPNLS-QRNLL-PLFSPEALDIAWDQHQRQVVKELNDRVKGTELEDSSVFNIIFQTAA 96
Query: 385 L---APALKFNGGGHINHSIFWHNLSPNGG--------KPSDVLTKAVEKDFGSWDNLKN 531
L A +F + NH F + + + + KAV ++FGS +NL +
Sbjct: 97 LPEHAATFQFASQAYNNHFFFQSLIGKRAADAKKNSKYEANAAINKAVNENFGSKENLLS 156
Query: 532 QLSTASVAVQGSGWGWLGYNKQMKXLQIATCQNQDP 639
++ + G+ W W+ + + + T Q P
Sbjct: 157 KIHELASNSFGACWLWIVIDDYNRLNLLRTFQAGSP 192
>SPBC12C2.04 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 29.9 bits (64), Expect = 0.49
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 292 KHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPAL-KFNGGGHINHSIFWHNLSPNGG 465
K+HA K+ QA K D +N+A + ++N N+ +FW +S +GG
Sbjct: 157 KYHAIISIGYMFRYLKIVQAAKKYVADNNLNIACTIARYNSAYEHNNKLFWWYMSKSGG 215
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 644 RPPLDWSRSSESMYGSTRTIFXYKNVRADYVKAIFDVA 757
+PPL WS SS +++G+++ N +D V + A
Sbjct: 101 KPPLTWSPSSANLFGTSKVTSIIGNNVSDVVPPVIKKA 138
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 625 QNQDPLQATTGLVPLFGIDVW 687
++ DPL+AT+ +PLF + W
Sbjct: 2142 KHTDPLRATSDFIPLFSMQRW 2162
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 723 RTFLXLKIVRVLPYIDSEERDQSSGGLQRIL 631
R+ +K + +P +D+EER + GLQ I+
Sbjct: 413 RSVEIIKNIAEMPTVDAEERSRIFAGLQHII 443
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 390 CKVDNGVDITFSLCLCEFLFSNV 322
C VD+ +I+ SLC EF+ S V
Sbjct: 452 CLVDSFENISHSLCTTEFILSRV 474
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,428,201
Number of Sequences: 5004
Number of extensions: 70618
Number of successful extensions: 195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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