Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D22
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 268 3e-72
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 268 3e-72
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 268 3e-72
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 254 5e-68
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 254 5e-68
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 254 5e-68
Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.050
Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical pr... 28 7.6
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 268 bits (657), Expect = 3e-72
Identities = 123/187 (65%), Positives = 148/187 (79%)
Frame = +1
Query: 148 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 327
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 328 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 507
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 508 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKXLQIATCQNQDPLQATTGLVPLFGIDVW 687
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 688 EHAYYLQ 708
EHAYYLQ
Sbjct: 185 EHAYYLQ 191
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 710 YKNVRADYVKAIFDVANWNDXSQRYEK 790
YKNVR DYV AI+ +ANW + S+R+ K
Sbjct: 192 YKNVRPDYVNAIWKIANWKNVSERFAK 218
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 268 bits (657), Expect = 3e-72
Identities = 123/187 (65%), Positives = 148/187 (79%)
Frame = +1
Query: 148 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 327
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 328 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 507
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 508 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKXLQIATCQNQDPLQATTGLVPLFGIDVW 687
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 688 EHAYYLQ 708
EHAYYLQ
Sbjct: 185 EHAYYLQ 191
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 710 YKNVRADYVKAIFDVANWNDXSQRYEK 790
YKNVR DYV AI+ +ANW + S+R+ K
Sbjct: 192 YKNVRPDYVNAIWKIANWKNVSERFAK 218
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 268 bits (657), Expect = 3e-72
Identities = 123/187 (65%), Positives = 148/187 (79%)
Frame = +1
Query: 148 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 327
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 328 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 507
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 508 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKXLQIATCQNQDPLQATTGLVPLFGIDVW 687
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 688 EHAYYLQ 708
EHAYYLQ
Sbjct: 185 EHAYYLQ 191
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 710 YKNVRADYVKAIFDVANWNDXSQRYEK 790
YKNVR DYV AI+ +ANW + S+R+ K
Sbjct: 192 YKNVRPDYVNAIWKIANWKNVSERFAK 218
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 254 bits (623), Expect = 5e-68
Identities = 118/176 (67%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 360
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 361 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLS 540
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 541 TASVAVQGSGWGWLGYNKQMKXLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQ 708
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 710 YKNVRADYVKAIFDVANWNDXSQRY 784
YKNVR DYV AI+ +ANW + S+R+
Sbjct: 189 YKNVRPDYVHAIWKIANWKNISERF 213
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 254 bits (623), Expect = 5e-68
Identities = 118/176 (67%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 360
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 361 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLS 540
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 541 TASVAVQGSGWGWLGYNKQMKXLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQ 708
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 710 YKNVRADYVKAIFDVANWNDXSQRY 784
YKNVR DYV AI+ +ANW + S+R+
Sbjct: 189 YKNVRPDYVHAIWKIANWKNISERF 213
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 254 bits (623), Expect = 5e-68
Identities = 118/176 (67%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 360
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 361 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLS 540
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 541 TASVAVQGSGWGWLGYNKQMKXLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQ 708
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 710 YKNVRADYVKAIFDVANWNDXSQRY 784
YKNVR DYV AI+ +ANW + S+R+
Sbjct: 189 YKNVRPDYVHAIWKIANWKNISERF 213
>Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical
protein F49H6.2 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.050
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 528 ESTVDSFCGSTGLRLGLAWLQQTNEEXANSYMPEPGSSAGHHWIGPALRNRCMGARVLSS 707
+ T DS C S G L Q+ + ANS++ G+S+ WIG CM + + ++
Sbjct: 90 QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSSGLTAT 148
Query: 708 XTR 716
TR
Sbjct: 149 CTR 151
>Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical
protein F23B2.3 protein.
Length = 626
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 613 FAXSSFVCCSQANPSLSPV 557
F SF CCS A+P+L+PV
Sbjct: 230 FQGESFDCCSLASPTLTPV 248
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Frame = +1
Query: 310 INNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIF---WH---NLSPNGGKP 471
+ N K A+ K + N + LK NG INH + W + NG P
Sbjct: 358 LRNAKQKAAKRARKLVKNWKKSAQNKSGVLKINGNHVINHDVVVKKWKVELKIEGNGESP 417
Query: 472 SDVLTKAVEKDFGSWD 519
V+ KA E G WD
Sbjct: 418 RKVVRKAKETS-GYWD 432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,152,306
Number of Sequences: 27780
Number of extensions: 409346
Number of successful extensions: 1026
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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