Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D20
(953 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.011
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.011
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.011
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.17
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.17
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 33 0.40
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.2
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 2.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 2.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.1
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 2.8
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 30 2.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 2.8
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 30 2.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.9
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 4.9
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 4.9
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 4.9
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 4.9
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 6.5
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.5
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 28 8.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.6
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 28 8.6
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 8.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.6
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 8.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP G PP G PP P P PPP G+PP
Sbjct: 274 PPPTGSPPPPPAGGSPP---PPRAGSPPPPPPPRGSPP 308
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPX-GXXPPAXXPXXXP--RPXPPPXXXGAPP 747
PPP G PP G PP P P PPP G+PP
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXG--PXFFXGXXXXPPKKXPPXPXGGG 530
PP G G G PPPP G P G PP PP P GG
Sbjct: 240 PPPPKGSPPLAGSGS---PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGGG 530
PP GG P G PPPP P G P P P G G
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPP---TGSLPPPQAGGSPPPAGTG 327
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPX---GXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPPR PP G P P PPP G+PP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +3
Query: 531 PPPXGXGGFFXGGXXXXPXKXXGPXXXGGGGXXFXPPPGXXXXPPXXGGTXXXXPFXXPP 710
PPP G G P P G PP G PP G PP
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 711 PXXP 722
P P
Sbjct: 300 PPPP 303
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 631 SPPPRGXXXXPPXGXXPPAXXPXXXPRP-XPPPXXXGAPP 747
SPP G PP PPA PR PPP G+PP
Sbjct: 246 SPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPP 281
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = +1
Query: 643 RGXXXXPPXGXXPPAXXPXXXPR-----PXPPPXXXGAPP 747
RG PP G PP P P PPP G+PP
Sbjct: 226 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP PP P P PPP PP
Sbjct: 257 PPPAAGSPPPPRTGSPP---PPPTGSPPPPPAGGSPPP 291
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 640 PRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PRG PP G P P P PP G+PP
Sbjct: 404 PRGPRRSPPTGSPPTGSPPTGRPPRGSPP--TGSPP 437
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Frame = +1
Query: 631 SPPPRGXXXXPP---XGXXPPAXXPXXXPRP---XPPPXXXGAPP 747
SPPP PP G PP P P PPP G+PP
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP G PP G PP P P PPP G+PP
Sbjct: 295 PPPTGSPPPPPAGGSPP---PPRAGSPPPPPPPRGSPP 329
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPX-GXXPPAXXPXXXP--RPXPPPXXXGAPP 747
PPP G PP G PP P P PPP G+PP
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXG--PXFFXGXXXXPPKKXPPXPXGGG 530
PP G G G PPPP G P G PP PP P GG
Sbjct: 261 PPPPKGSPPLAGSGS---PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGGG 530
PP GG P G PPPP P G P P P G G
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPP---TGSLPPPQAGGSPPPAGTG 348
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPX---GXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPPR PP G P P PPP G+PP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +3
Query: 531 PPPXGXGGFFXGGXXXXPXKXXGPXXXGGGGXXFXPPPGXXXXPPXXGGTXXXXPFXXPP 710
PPP G G P P G PP G PP G PP
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 711 PXXP 722
P P
Sbjct: 321 PPPP 324
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 631 SPPPRGXXXXPPXGXXPPAXXPXXXPRP-XPPPXXXGAPP 747
SPP G PP PPA PR PPP G+PP
Sbjct: 267 SPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPP 302
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = +1
Query: 643 RGXXXXPPXGXXPPAXXPXXXPR-----PXPPPXXXGAPP 747
RG PP G PP P P PPP G+PP
Sbjct: 247 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP PP P P PPP PP
Sbjct: 278 PPPAAGSPPPPRTGSPP---PPPTGSPPPPPAGGSPPP 312
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 640 PRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PRG PP G P P P PP G+PP
Sbjct: 425 PRGPRRSPPTGSPPTGSPPTGRPPRGSPP--TGSPP 458
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Frame = +1
Query: 631 SPPPRGXXXXPP---XGXXPPAXXPXXXPRP---XPPPXXXGAPP 747
SPPP PP G PP P P PPP G+PP
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP G PP G PP P P PPP G+PP
Sbjct: 280 PPPTGSPPPPPAGGSPP---PPRAGSPPPPPPPRGSPP 314
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPX-GXXPPAXXPXXXP--RPXPPPXXXGAPP 747
PPP G PP G PP P P PPP G+PP
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXG--PXFFXGXXXXPPKKXPPXPXGGG 530
PP G G G PPPP G P G PP PP P GG
Sbjct: 246 PPPPKGSPPLAGSGS---PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGGG 530
PP GG P G PPPP P G P P P G G
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPP---TGSLPPPQAGGSPPPAGTG 333
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPX---GXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPPR PP G P P PPP G+PP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +3
Query: 531 PPPXGXGGFFXGGXXXXPXKXXGPXXXGGGGXXFXPPPGXXXXPPXXGGTXXXXPFXXPP 710
PPP G G P P G PP G PP G PP
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 711 PXXP 722
P P
Sbjct: 306 PPPP 309
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 631 SPPPRGXXXXPPXGXXPPAXXPXXXPRP-XPPPXXXGAPP 747
SPP G PP PPA PR PPP G+PP
Sbjct: 252 SPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPP 287
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = +1
Query: 643 RGXXXXPPXGXXPPAXXPXXXPR-----PXPPPXXXGAPP 747
RG PP G PP P P PPP G+PP
Sbjct: 232 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP PP P P PPP PP
Sbjct: 263 PPPAAGSPPPPRTGSPP---PPPTGSPPPPPAGGSPPP 297
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 640 PRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PRG PP G P P P PP G+PP
Sbjct: 410 PRGPRRSPPTGSPPTGSPPTGRPPRGSPP--TGSPP 443
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Frame = +1
Query: 631 SPPPRGXXXXPP---XGXXPPAXXPXXXPRP---XPPPXXXGAPP 747
SPPP PP G PP P P PPP G+PP
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXG-PXFFXGXXXXPPKKXPPXPXGGGXFFXXXXXXX 500
PP G PGG PPPP G P + P PP P G G +
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFP 452
Query: 499 XXXXXXXXXXXGGGGXXFFRG 437
GG F RG
Sbjct: 453 PVGAPPPGAAGAPGGNPFARG 473
Score = 32.7 bits (71), Expect = 0.40
Identities = 26/105 (24%), Positives = 27/105 (25%), Gaps = 2/105 (1%)
Frame = +3
Query: 438 PRKKXXPPPPXXXXXXXXXXXXXXXXXXKKXPPPXGXGGFFXGGXXXX--PXKXXGPXXX 611
P+ PPPP PPP G G P GP
Sbjct: 361 PQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAP 420
Query: 612 GGGGXXFXPPPGXXXXPPXXGGTXXXXPFXXPPPXXPXXTXXGPP 746
G G P G PP G P PP P G P
Sbjct: 421 GSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAP 465
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 565 GAXLXXPXKXXGPXGXXXXXXXSPPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAP 744
GA P P G PPP G P P P P P G P
Sbjct: 388 GAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPP 447
Query: 745 PXXF 756
P F
Sbjct: 448 PTGF 451
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXX---PPPPXXXGPXFFXGXXXXPPKKXPPXPXGG 533
PP GG P G + PPPP P G PP PP P G
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXXPP 563
PP G PG PPPP GP G PP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP PP P PRP PPP PP
Sbjct: 265 PPPPSVTPMPPP--MPPT--PGMTPRPPPPPSSGMWPP 298
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +1
Query: 583 PXKXXGPXGXXXXXXXSPPPRGXXXXPPXGXXPPAXXPXXXPR--PXPPPXXXGAPP 747
P GP G PPP G PP P P P PPP APP
Sbjct: 321 PPSRFGPPGMGGMPP--PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXX---PPPPXXXGPXFFXGXXXXPPKKXPPXPXGG 533
PP GG P G + PPPP P G PP PP P G
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXXPP 563
PP G PG PPPP GP G PP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP PP P PRP PPP PP
Sbjct: 275 PPPPSVTPMPPP--MPPT--PGMTPRPPPPPSSGMWPP 308
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +1
Query: 583 PXKXXGPXGXXXXXXXSPPPRGXXXXPPXGXXPPAXXPXXXPR--PXPPPXXXGAPP 747
P GP G PPP G PP P P P PPP APP
Sbjct: 331 PPSRFGPPGMGGMPP--PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +1
Query: 583 PXKXXGPXGXXXXXXXSPPPRGXXXXPPX--GXXPPAXXPXXXPRPXPPPXXXG 738
P P G PPP PP G PP P P P PPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.92
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Frame = +1
Query: 601 PXGXXXXXXXSPPPRGXXXXPPX-GXXPPAXXPXXXPR-----PXPPPXXXGAPP 747
P G PPP PP G PP P P P PPP G PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 659 PPXXGXXXXPXXLXXPPAXXPXPXXXGPPXXFXXXKKXPPPP 784
PP G P PP P P PP F PPPP
Sbjct: 752 PPISGGPPPPPP---PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +3
Query: 531 PPPXGXGGF--FXGGXXXXPXKXXGPXXXGGGGXXFXPPPGX-XXXPPXXGGTXXXXPFX 701
PPP GG GG P P GG PP G PP G P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 702 XPPP 713
PPP
Sbjct: 787 PPPP 790
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 645 PGGGXXPPPPPXPXG 601
P GG PPPPP P G
Sbjct: 764 PPGGCPPPPPPPPPG 778
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = -2
Query: 694 GXXXXVPPXXGGXXXXPG-----GGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGGG 530
G +PP GG PG GG PPPP G G PP P GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 645 PGGGXXPPPPPXPXG 601
PGG PPPPP P G
Sbjct: 765 PGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +1
Query: 583 PXKXXGPXGXXXXXXXSPPPRGXXXXPPX--GXXPPAXXPXXXPRPXPPPXXXG 738
P P G PPP PP G PP P P P PPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.92
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Frame = +1
Query: 601 PXGXXXXXXXSPPPRGXXXXPPX-GXXPPAXXPXXXPR-----PXPPPXXXGAPP 747
P G PPP PP G PP P P P PPP G PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 659 PPXXGXXXXPXXLXXPPAXXPXPXXXGPPXXFXXXKKXPPPP 784
PP G P PP P P PP F PPPP
Sbjct: 752 PPISGGPPPPPP---PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +3
Query: 531 PPPXGXGGF--FXGGXXXXPXKXXGPXXXGGGGXXFXPPPGX-XXXPPXXGGTXXXXPFX 701
PPP GG GG P P GG PP G PP G P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 702 XPPP 713
PPP
Sbjct: 787 PPPP 790
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 645 PGGGXXPPPPPXPXG 601
P GG PPPPP P G
Sbjct: 764 PPGGCPPPPPPPPPG 778
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = -2
Query: 694 GXXXXVPPXXGGXXXXPG-----GGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGGG 530
G +PP GG PG GG PPPP G G PP P GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 645 PGGGXXPPPPPXPXG 601
PGG PPPPP P G
Sbjct: 765 PGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +1
Query: 583 PXKXXGPXGXXXXXXXSPPPRGXXXXPPX--GXXPPAXXPXXXPRPXPPPXXXG 738
P P G PPP PP G PP P P P PPP G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.5 bits (68), Expect = 0.92
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Frame = +1
Query: 601 PXGXXXXXXXSPPPRGXXXXPPX-GXXPPAXXPXXXPR-----PXPPPXXXGAPP 747
P G PPP PP G PP P P P PPP G PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 659 PPXXGXXXXPXXLXXPPAXXPXPXXXGPPXXFXXXKKXPPPP 784
PP G P PP P P PP F PPPP
Sbjct: 335 PPISGGPPPPPP---PPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +3
Query: 531 PPPXGXGGF--FXGGXXXXPXKXXGPXXXGGGGXXFXPPPGX-XXXPPXXGGTXXXXPFX 701
PPP GG GG P P GG PP G PP G P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 702 XPPP 713
PPP
Sbjct: 370 PPPP 373
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 645 PGGGXXPPPPPXPXG 601
P GG PPPPP P G
Sbjct: 347 PPGGCPPPPPPPPPG 361
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = -2
Query: 694 GXXXXVPPXXGGXXXXPG-----GGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGGG 530
G +PP GG PG GG PPPP G G PP P GG
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPPPGGLPPISGG 340
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 645 PGGGXXPPPPPXPXG 601
PGG PPPPP P G
Sbjct: 348 PGGCPPPPPPPPPGG 362
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGGE 630
GG GGG GRG +G GG GG +GG +
Sbjct: 188 GGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQ 226
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPP----AXXPXXXPRPXPPPXXXGAPP 747
PPP+G PP P A RP PPP G PP
Sbjct: 66 PPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPP 107
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPP---AXXPXXXPRPXPPPXXXGAPP 747
PPP+G PP P + RP PPP G+PP
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 138
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPP---AXXPXXXPRPXPPPXXXGAPP 747
PPP+G PP P + RP PPP G+PP
Sbjct: 129 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 169
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPP---AXXPXXXPRPXPPPXXXGAPP 747
PPP+G PP P + RP PPP G PP
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP 75
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPP---AXXPXXXPRPXPPPXXXGAPP 747
PPP+G PP P + RP PPP G PP
Sbjct: 160 PPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPP 200
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPP---AXXPXXXPRPXPPPXXXGAPP 747
PPP+G PP P + RP PPP G PP
Sbjct: 253 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP 293
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPP---AXXPXXXPRPXPPPXXXGAP 744
PPP+G PP P + RP PPP G+P
Sbjct: 191 PPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSP 230
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +1
Query: 631 SPPPRGXXXXPPXGXXPPAXXPXXXPRP-XPPPXXXGAPPXXF 756
+PPP G PP G P P P P GAPP F
Sbjct: 718 APPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPF 760
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGG 636
GG GGG GRG G GG GG RGG
Sbjct: 319 GGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGG 355
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP PP P P P PPP PP
Sbjct: 243 PPPPSPVCMPP----PPPPCPMPIPCPPPPPACSCPPP 276
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPPXXF 756
PPP G PP G PP P R PPP PP F
Sbjct: 290 PPPFGFFPPPPRGHFPP-PPPHFMGRGMPPPFM--PPPPHF 327
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPPXXF 756
PPP G PP G PP P R PPP PP F
Sbjct: 290 PPPFGFFPPPPRGHFPP-PPPHFMGRGMPPPFM--PPPPHF 327
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +1
Query: 634 PPPRGXXXX---PPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPPRG PP PP P P PPP G PP
Sbjct: 1574 PPPRGGSHCQGPPPLMGGPPPRL--GMPPPGPPPPNGGPPP 1612
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 746 GGAPXXXGGGX--GRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG GRG G GG GG RGGG
Sbjct: 26 GGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGG 65
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +1
Query: 634 PPPRGXXXXPPX-GXXPPAXXPXXXPRPXPPPXXXGAPP 747
P P G PP G PP P PPP G PP
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = +1
Query: 634 PPPRGXXXXPPX----GXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP G PP P P PPP G P
Sbjct: 86 PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAP 127
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG P GGG
Sbjct: 153 GGCGGGGGGGCGGGGG-GGCGGGSSGGGGYAVAPSGGG 189
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 744 GGPXXXGXGXXAGGXXRXXGXXXXPXWGGXXXXPGGGXXPPPPPXPXGA 598
GG G G GG G GG P PPPPP P A
Sbjct: 268 GGGGYAGGGGGGGGSS---GGYAGSSGGGGYSAPAAAPPPPPPPPPPPA 313
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG P GGG
Sbjct: 153 GGCGGGGGGGCGGGGG-GGCGGGSSGGGGYAVAPSGGG 189
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 744 GGPXXXGXGXXAGGXXRXXGXXXXPXWGGXXXXPGGGXXPPPPPXPXGA 598
GG G G GG G GG P PPPPP P A
Sbjct: 268 GGGGYAGGGGGGGGSS---GGYAGSSGGGGYSAPAAAPPPPPPPPPPPA 313
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXP--XXXPRPXPPP 726
PPP G PP G P P P P PPP
Sbjct: 693 PPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPP 725
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 597 GPXXXGGGGXXFXPPPGXXXXPPXXGGTXXXXPFXXP 707
GP G GG PP G PP G PF P
Sbjct: 9 GPMYGGAGGGGGGPPRGPPQQPPQPQGGGVAVPFPIP 45
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXP--XXXPRPXPPP 726
PPP G PP G P P P P PPP
Sbjct: 693 PPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPP 725
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 744 GGPXXXGXGXXAGGXXRXXGXXXXPXWGGXXXXPGGGXXPPPPPXP 607
GG G G GG G GG G G PPPP P
Sbjct: 26 GGAGGCGGGGGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPP 71
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -3
Query: 744 GGPXXXGXGXXAGGXXRXXGXXXXPXWGGXXXXPGGGXXPPPPPXP 607
GG G G GG G GG G G PPPPP P
Sbjct: 32 GGGGGCGGGGGCGGGCGYGGGGGCGYGGGY----GCGIPPPPPPPP 73
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG GRG G GG GG RGGG
Sbjct: 92 GGRGGGGGGGGGRGGGGGGRGGGGGGGGG-----RGGG 124
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
G GGG G G +G GG GG GGG
Sbjct: 88 GNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG GRG G G GG RG G
Sbjct: 99 GGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +1
Query: 631 SPPPRGXXXXPPXGXX-PPAXXPXXXPR--PXPPPXXXGAPP 747
SPPPR PP PP P PR P PP PP
Sbjct: 154 SPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG GRG +G G GG GGG
Sbjct: 47 GGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGG 84
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGG 160
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGG 168
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 726 GXGXXAGGXXRXXGXXXXPXWGGXXXXPGGGXXPPPPPXPXGAXXFXGXXKXG 568
G G GG G GG GGG PPPPP G G G
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGC---GGGCAPPPPPPACGGGCGGGGGGCG 73
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 67 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 104
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 174
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 144 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 181
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 744 GGPXXXGXGXXAGGXXRXXGXXXXPXWGGXXXXPGGGXXPPPPPXPXG 601
GG G GG G P GG PG G PPP G
Sbjct: 160 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG 207
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 744 GGPXXXGXGXXAGGXXRXXGXXXXPXWGGXXXXPGGGXXPPPPPXPXG 601
GG G GG G P GG PG G PPP G
Sbjct: 440 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG 487
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 4.9
Identities = 35/170 (20%), Positives = 39/170 (22%), Gaps = 2/170 (1%)
Frame = +3
Query: 219 SRPGXXGXXKXKTXXQXKXTXPXXXXPPQXGGXXXPXKKKXXXXXPXPPXKXXKKKPFF* 398
+RPG G + P P G P P P +P
Sbjct: 1264 NRPGPNGPNGPLDPNKPGPNGPNGPSDPNKPGPNGPNGPSD----PNKPGPNGPNEPSDP 1319
Query: 399 KKXXXXGXXGPXXPRKKXXPPPPXXXXXXXXXXXXXXXXXXKKXPPPXGXGGFFXGGXXX 578
K G GP P K P P P G G
Sbjct: 1320 NKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGSSDPNKPG 1379
Query: 579 X--PXKXXGPXXXGGGGXXFXPPPGXXXXPPXXGGTXXXXPFXXPPPXXP 722
P P GGG P P P G + P P P P
Sbjct: 1380 PNGPSNPSVPESSTGGGPSPGPSPNEPSNPSILGPSTGGDPSPGPSPNEP 1429
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP G PP G PP P PPP PP
Sbjct: 94 PPPIGMPP-PPLGMPPPHIGLGAAPYAVPPPMSLLGPP 130
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP G PP G PP P PPP PP
Sbjct: 117 PPPIGMPP-PPLGMPPPHIGLGAAPYAVPPPMSLLGPP 153
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP G PP G PP P PPP PP
Sbjct: 367 PPPIGMPP-PPLGMPPPHIGLGAAPYAVPPPMSLLGPP 403
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +3
Query: 612 GGGGXXFXP----PPGXXXXPPXXGGTXXXXPFXXPPP 713
GGGG P PPG PP G F PPP
Sbjct: 515 GGGGVPMIPMVPMPPGMIGLPPGPPGRRRKSRFDQPPP 552
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG G G G GG GG GGG
Sbjct: 92 GGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGG 129
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP G PP +P PPP PP
Sbjct: 94 PPPPRNNCLPPPGPPPPC---QQYQQPQPPPCQRPQPP 128
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP G PP +P PPP PP
Sbjct: 94 PPPPRNNCLPPPGPPPPC---QQYQQPQPPPCQRPQPP 128
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPPAXXPXXXPRPXPPPXXXGAPP 747
PPP PP G PP +P PPP PP
Sbjct: 94 PPPPRNNCLPPPGPPPPC---QQYQQPQPPPCQRPQPP 128
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 642 GGGXXPPPPPXPXGAXXFXGXXKXGPXKKXPXXP 541
GGG PPPP P G G G P P
Sbjct: 25 GGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAP 58
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 634 PPPRGXXXXPPXGXXPP-AXXPXXXPRPXPPPXXXGAP 744
PPP G PP G PP A P P P P AP
Sbjct: 13 PPPVGY-VPPPMGYAPPIAPIPMVAPMPVPVAPMMAAP 49
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGGG 530
PP G PPPP P G PP PP P G G
Sbjct: 616 PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP---PPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGGG 530
PP G PPPP P G PP PP P G G
Sbjct: 442 PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP---PPPPSGAG 487
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = -2
Query: 676 PPXXGGXXXXPGG-GXKXXPPPPXXXGPXFFXGXXXXPP-KKXPPXPXG 536
PP G PG G P PP G G PP +K PP P G
Sbjct: 115 PPGPPGRDGRPGAPGRPGNPGPPGRDGA-LLPGPPPKPPCQKCPPGPPG 162
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 598 GPXGXXXXXXXSPPPRGXXXXPPXGXXPPAXXPXXXPRPXPP 723
GP G PPP+ G PP P P P PP
Sbjct: 139 GPSGHLMGMVGGPPPQ-HMMQQQGGGGPPQFVPNSSPMPLPP 179
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +1
Query: 637 PPRGXXXXPPX-GXXPPAXXPXXX---PRPXPPPXXXGAPP 747
PP G PP G P + P P P PPP G PP
Sbjct: 1293 PPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPP 1333
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = -2
Query: 745 GGPXXVWXGXXGGGXXKGXXXXV-PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXX 569
G P GG G PP G PGGG PP P GP G
Sbjct: 239 GQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGP--PGPSGRPGAPGQ 296
Query: 568 P-PKKXPPXPXGGG 530
P P P P G
Sbjct: 297 PGPDGQPGAPGNDG 310
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -2
Query: 676 PPXXGGXXXXPGGGXKXXPPPPXXXGPXFFXGXXXXPPKKXPPXPXGG 533
PP G G G P PP GP G P + P GG
Sbjct: 256 PPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGG 303
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 746 GGAPXXXGGGXGRGXXKGXXAGGXXPXGGXXXXPRGGG 633
GG GGG GR G AGG GG GGG
Sbjct: 332 GGGGYSTGGGGGRAD-SGGAAGGAGGAGGYSGGGGGGG 368
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +1
Query: 637 PPRGXXXXPPX-GXXPPAXXPXXX---PRPXPPPXXXGAPP 747
PP G PP G P + P P P PPP G PP
Sbjct: 1293 PPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPP 1333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,013,056
Number of Sequences: 27780
Number of extensions: 232987
Number of successful extensions: 3156
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2377
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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