Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D18
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0376 - 2934115-2934603                                           31   1.3  
09_04_0748 + 19901687-19902460                                         29   6.7  
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     28   8.9  
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616...    28   8.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     28   8.9  

>12_01_0376 - 2934115-2934603
          Length = 162

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 679 QRWRNPTGL*RYQAFPPWXAPSVRSPC 759
           + WR P    R  A PPW  P +  PC
Sbjct: 36  RHWRTPPKRARSSAAPPWAPPEIEIPC 62


>09_04_0748 + 19901687-19902460
          Length = 257

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 628 SIGSAPLDEHHKNRRSSQRWRNPTGL*RYQAFPPWXAP 741
           S G+A LD+  ++  S    R P  +  Y AF PW  P
Sbjct: 101 SAGAATLDKLLRDEASDSGGRRPVRVLVYDAFLPWGRP 138


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 729 RGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 613
           RGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 26  RGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>07_03_0697 +
           20759176-20759817,20760592-20760708,20761422-20761696,
           20761906-20762068,20762293-20762421,20762989-20763713,
           20763853-20764081
          Length = 759

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 622 RFSIGSAPLDEHHKNRRSSQRWRNP 696
           RFS  SAP+D+H + RR      NP
Sbjct: 132 RFSSSSAPVDKHGRRRRKKGGRENP 156


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 448 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--EXTCEQKASKRPGTV 603
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,542,914
Number of Sequences: 37544
Number of extensions: 383451
Number of successful extensions: 925
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)