Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D17
(947 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 38 0.015
07_03_1136 + 24218601-24218734,24218769-24219906 35 0.11
04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202 34 0.19
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.33
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 33 0.44
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 33 0.44
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 33 0.44
03_01_0515 - 3864796-3865425 33 0.44
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.58
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.77
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 31 1.0
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 31 1.3
12_02_1174 - 26696869-26698191 31 1.8
11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374... 31 1.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.8
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 30 3.1
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 25 3.5
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 29 4.1
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 4.1
06_03_1310 + 29238644-29240260 29 4.1
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 29 4.1
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 29 4.1
01_05_0490 + 22672241-22674679 29 4.1
08_01_0059 - 394001-394708 29 7.1
06_01_0749 + 5599238-5600128 29 7.1
12_02_0046 + 12830974-12832386 28 9.4
10_08_0362 + 17211788-17212300,17213342-17213623,17214071-17214139 28 9.4
06_01_0486 - 3455030-3455770 28 9.4
01_06_1427 + 37296883-37297588,37298504-37298658,37300596-37300955 28 9.4
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 37.5 bits (83), Expect = 0.015
Identities = 21/74 (28%), Positives = 27/74 (36%)
Frame = +3
Query: 714 RRAP*TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXX 893
R +P Q + S P P P + + P PP + A P PPP G P
Sbjct: 294 RESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPP-PPPPPKAAPPPPPPKGPPPPPPAKG 352
Query: 894 PQXGVXXQTPPXPP 935
P + P PP
Sbjct: 353 PPPPPPPKGPSPPP 366
Score = 37.1 bits (82), Expect = 0.020
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 747 PXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXG 866
P P+ P P P + P PP G +G P PPP G
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384
Score = 35.1 bits (77), Expect = 0.082
Identities = 23/92 (25%), Positives = 30/92 (32%)
Frame = +3
Query: 585 LXPKGXQGAKXRKRAAXXAFXHGXXPPGRASXXSXLXXGXAXPRRAP*TXQGVXPXXXPS 764
L P ++ + AA PP + P+ AP P P
Sbjct: 290 LPPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPP 349
Query: 765 XRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPP 860
+ P P P S P PP G + P PPP
Sbjct: 350 AKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/99 (28%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Frame = +3
Query: 660 PPGRASXX---SXLXXGXAXPRRAP*TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXG 830
PPGR S S A P P P P P P PP
Sbjct: 291 PPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPP-PPPP 349
Query: 831 TRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPPXPPXXXA 947
+G P PPP G P G PP PP A
Sbjct: 350 AKGPPPPPPPKG--PSPPPPPPPGGKKGGPPPPPPKGGA 386
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +3
Query: 747 PXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPP 926
P P P P P + G P PP G + P PPP G P G + P
Sbjct: 336 PPPPPPKGPPPPPPAK--GPPPPPPPKGP--SPPPPPPPGGKKGGPPPPPPKGGASRPPA 391
Query: 927 XP 932
P
Sbjct: 392 AP 393
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 34.7 bits (76), Expect = 0.11
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -2
Query: 934 GGXGGVCXXTPXWGXXXKXXXGIPXGGGXGXAPRVPXGGKXGQDPXXRXGXGPGXRXEGX 755
GG GG P G GGG G R P GG G P G G G G
Sbjct: 151 GGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGG 210
Query: 754 XXG 746
G
Sbjct: 211 GGG 213
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = -2
Query: 934 GGXGGVCXXTPXWGXXXKXXXGIPXGGGXGXAPRVPXGGKXGQDPXXR-XGXGPG 773
GG GG P G P GGG G APR GG G R G G G
Sbjct: 112 GGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRG 166
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/80 (32%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Frame = -2
Query: 934 GGXGGVCXXTPXWGXXXKXXXGIPXGGGXGXA-PRVPXGGK---XGQDP-XXRXGXGPGX 770
GG GG P G + GGG G A R P GG+ G+ P G GPG
Sbjct: 125 GGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGR 184
Query: 769 RXEGXXXGXTPWXV*GARRG 710
G G P G G
Sbjct: 185 APGGGGGGGGPGRAPGGGGG 204
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = -1
Query: 548 PXXRXGGGGDRSPQPRARGXGVSERG--NGRAPXTXTAXPRGGGXSXMQXKXXXXXPGRG 375
P GGGG R P P G G + R G A P GGG + G G
Sbjct: 121 PPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGG 180
Query: 374 DTKXRP 357
P
Sbjct: 181 GPGRAP 186
>04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202
Length = 234
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/70 (31%), Positives = 25/70 (35%)
Frame = -1
Query: 563 RXXGEPXXRXGGGGDRSPQPRARGXGVSERGNGRAPXTXTAXPRGGGXSXMQXKXXXXXP 384
R +P R G G S QP GV++ G G A R GG S
Sbjct: 112 RSPAKPHGRKEGSGGASRQPAQAARGVTQGGGGGRRHICAALARSGGVSAGGGDGVSNSG 171
Query: 383 GRGDTKXRPS 354
G GD R S
Sbjct: 172 GDGDGNGRVS 181
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 33.1 bits (72), Expect = 0.33
Identities = 19/71 (26%), Positives = 24/71 (33%)
Frame = +3
Query: 723 P*TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQX 902
P +G P S P P + P PP + P PPP +P
Sbjct: 1140 PPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPP 1199
Query: 903 GVXXQTPPXPP 935
+ Q PP PP
Sbjct: 1200 PLPIQPPPIPP 1210
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/63 (25%), Positives = 16/63 (25%)
Frame = +3
Query: 747 PXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPP 926
P P P P P P PP P PPP P P
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQP 1196
Query: 927 XPP 935
PP
Sbjct: 1197 APP 1199
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 32.7 bits (71), Expect = 0.44
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 780 PXPXRXXGSXPXFPPXGTRGAXPXPPP 860
P P R G+ P PP G G P PPP
Sbjct: 615 PPPPRPPGAPPPPPPPGKPGGPPPPPP 641
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +3
Query: 759 PSXRXPGPXPXRXXGSXPXFPPXGTR--GAXPXPPPXGIPXXXXXXXPQXG 905
P P P P + PP R GA P PPP G P P+ G
Sbjct: 594 PRVPRPPPAPSATANTASALPPPPPRPPGAPPPPPPPGKPGGPPPPPPRPG 644
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 32.7 bits (71), Expect = 0.44
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 780 PXPXRXXGSXPXFPPXGTRGAXPXPPP 860
P P R G+ P PP G G P PPP
Sbjct: 920 PPPPRPPGAPPPPPPPGKPGGPPPPPP 946
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 774 PGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXG 905
P P S PP GA P PPP G P P G
Sbjct: 906 PAPSATANTASALSPPPPRPPGAPPPPPPPGKPGGPPPPPPPPG 949
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 32.7 bits (71), Expect = 0.44
Identities = 27/87 (31%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Frame = +3
Query: 690 LXXGXAXPRRAP*TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGI 869
L G P R P V P P P P P G P PP G P PPP +
Sbjct: 257 LPNGSGGPPRPP--PPQVPPP--PPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPL 312
Query: 870 ---PXXXXXXXPQXG--VXXQTPPXPP 935
P P G + TP PP
Sbjct: 313 ANGPPRSIPPPPMTGGAMANFTPGAPP 339
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.7 bits (71), Expect = 0.44
Identities = 24/92 (26%), Positives = 26/92 (28%)
Frame = +3
Query: 660 PPGRASXXSXLXXGXAXPRRAP*TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXGTRG 839
P AS S P P + P P P P S P PP
Sbjct: 33 PEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPL---- 88
Query: 840 AXPXPPPXGIPXXXXXXXPQXGVXXQTPPXPP 935
P PPP P P +PP PP
Sbjct: 89 PPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.58
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +3
Query: 774 PGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPPXPPXXXA 947
P P P R P ++G P PPP +P P GV PP PP A
Sbjct: 667 PPPPPPRSSSRTPTGAATSSKGPPPPPPPP-LPPANRTNGP--GVPSAPPPPPPPPPA 721
Score = 31.9 bits (69), Expect = 0.77
Identities = 20/68 (29%), Positives = 23/68 (33%)
Frame = +3
Query: 330 PQXSSSAPRGPSFCVXPPXGXXGXFSLHXXXPPPPGXXXXXXXXXXXXXLTDXPPPGARL 509
P +++AP P PP G FS PPPP PPP
Sbjct: 537 PSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPN 596
Query: 510 XXAVSPPP 533
SPPP
Sbjct: 597 CLVPSPPP 604
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +3
Query: 747 PXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPP 926
P P+ P P P P PP G + A PPP P PQ PP
Sbjct: 535 PSPSPTAAAPPPPPP------PPPPPSGNKPAFSPPPPP--PPPPPPPLPQSNYASSQPP 586
Query: 927 XPP 935
PP
Sbjct: 587 PPP 589
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.9 bits (69), Expect = 0.77
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 759 PSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPP 926
P + P P P P PP G + P PPP P P PP
Sbjct: 77 PQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
Score = 29.9 bits (64), Expect = 3.1
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +3
Query: 723 P*TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQX 902
P QG P P GP P + PP G PPP P PQ
Sbjct: 11 PPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQF 70
Query: 903 GV-----XXQTPPXPP 935
Q PP PP
Sbjct: 71 NFGPGPPQQQQPPPPP 86
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +3
Query: 735 QGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXX 914
QG P P P P F P + P PPP + P GV
Sbjct: 45 QGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQ-MYYQPPPPPPPYGVNS 103
Query: 915 QTPPXPP 935
PP PP
Sbjct: 104 SQPPPPP 110
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 833 AXRXPXPPPXRYPXXXFXXXAPXXGXXTNPPXPPXP 940
A R P PPP P P G NPP PP P
Sbjct: 481 ALRIPNPPPR--PSVSVPHSGPSNGSAANPPKPPPP 514
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/95 (29%), Positives = 32/95 (33%)
Frame = +3
Query: 651 GXXPPGRASXXSXLXXGXAXPRRAP*TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXG 830
G PP + G A P P P PS PG P R G+ P P G
Sbjct: 203 GFPPPLPSPGAGAPRGGSATPAMIPGHPGAFYPFPPPSL--PGVGPPRGGGAIPGL-PAG 259
Query: 831 TRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPPXPP 935
PPP +P GV + PP PP
Sbjct: 260 FPFLLRPPPPLPVP----------GVICRPPPSPP 284
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 1.8
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +3
Query: 711 PRRAP*TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXX 890
P P T V P P P P P S P PP P PP P
Sbjct: 125 PPPPPRTRTRVEPPHRPPPVKPQPPP-----SLPPPPPPPPPPPPPRPPSVKPPVVQPKP 179
Query: 891 XPQXGVXXQTPPXPP 935
P + +PP PP
Sbjct: 180 QPPPSLQPPSPPPPP 194
>11_06_0188 +
21036465-21036627,21036735-21036883,21037369-21037484,
21037939-21038101
Length = 196
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -1
Query: 581 LSRAIPRXXGEP--XXRXGGGGDRSPQPRARGXGVSERGNGRAPXTXTAXPRGGG 423
LSR +P+ G+ R GG G R RG G RG G AP PRGGG
Sbjct: 135 LSRFLPQPKGQSQGGGRGGGRGGGRGGFRGRGGG-GFRGRG-APRGRGGPPRGGG 187
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 774 PGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPPXPP 935
P P G P PP G G P PPP P P P PP
Sbjct: 1137 PAPPLPEGIGGVPPPPPVGGLGGPPAPPP---PAGFRGGTPPPNAHGGVAPPPP 1187
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +3
Query: 759 PSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGV-XXQTPPXPP 935
P P P G P P G P PPP GI P G+ Q PP PP
Sbjct: 1082 PPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGI-TGVPPPPPIGGLGGHQAPPAPP 1140
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 29.9 bits (64), Expect = 3.1
Identities = 22/74 (29%), Positives = 29/74 (39%)
Frame = -1
Query: 590 AXXLSRAIPRXXGEPXXRXGGGGDRSPQPRARGXGVSERGNGRAPXTXTAXPRGGGXSXM 411
A LS ++ GEP R R+P P R E+ RA + T+ P GGG
Sbjct: 7 AHDLSPSMSGDDGEPNPRRRA---RTPPPPPRQSPRREKALERAEGSATSTPTGGGEGRR 63
Query: 410 QXKXXXXXPGRGDT 369
+ G G T
Sbjct: 64 DGERRLLVYGDGST 77
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 25.4 bits (53), Expect(2) = 3.5
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +3
Query: 846 PXPPPXGIPXXXXXXXPQXGVXXQTPPXPP 935
P PPP P P+ + PP PP
Sbjct: 349 PPPPPPPPPPPPPPPPPKLNTAPKPPPPPP 378
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 816 FPPXGTRGAXPXPPP 860
FPP A P PPP
Sbjct: 298 FPPVAAIAAPPAPPP 312
>10_08_0343 -
16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 539 RXGGGGDRSPQPRARGXGVSERGNG 465
R GGGG S + R RG G + RG G
Sbjct: 856 RGGGGGPNSQRGRGRGGGGAGRGGG 880
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Frame = +3
Query: 747 PXXXPSXRXPG----PXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXX 914
P P PG P P + P F G PPP G+P P GV
Sbjct: 368 PSMQPDMLAPGVPRFPPPPPPPDTRPPFMAPGVNARPLPPPPPGLPPAQMQMAP-FGVPP 426
Query: 915 QTPPXPP 935
PP P
Sbjct: 427 GPPPMLP 433
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.5 bits (63), Expect = 4.1
Identities = 28/103 (27%), Positives = 32/103 (31%), Gaps = 8/103 (7%)
Frame = +3
Query: 648 HGXXPPGRASXXSXLXXGXAXPRRAP*TXQGVXPXXX---PSXRXPGPX----PXRXXGS 806
HG PP +S G P P P P P P + G
Sbjct: 434 HGASPPSSSSSPPTEHPGYVLPPLTPPPPTTTPPGHHAPVPGTPSSPPSSSWSPPQGGGG 493
Query: 807 XPXFPPX-GTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPPXP 932
FPP G + P PPP G P GV +PP P
Sbjct: 494 KLPFPPVHGVAYSSPPPPPSG---DKLPFPPVYGVAYSSPPPP 533
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 539 RXGGGGDRSPQPRARGXGVSERGNGRAPXTXTAX-PRGGGXSXMQXKXXXXXPGRGD 372
R GGGG PR G G G G P PRG G S + GRGD
Sbjct: 17 RGGGGGG----PRGCGGGGPRSGGGGGPRGGGGGGPRGSGSSKPRRGDGGLGCGRGD 69
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +3
Query: 774 PGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPPXP 932
PGP P + P PP GA P PPP + P + PP P
Sbjct: 623 PGPPPMMANAA-PVPPPSMANGAGPVPPPIAV-----APPPAPPIAGAAPPPP 669
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +3
Query: 759 PSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPPXPP 935
P P P P P PP + P PPP P P+ V T P PP
Sbjct: 638 PPQPPPPPPPTTRRSRKPPQPP-----SRPAPPPPPPPQQQPPFYPRRAVVYYTYPLPP 691
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 774 PGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPPXPP 935
P P P R P PP R A P P P P P P PP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPP 55
>06_01_0749 + 5599238-5600128
Length = 296
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 539 RXGGGGDRSPQPRARGXGVSERGNGRAP 456
R GDR P RA +S RG G AP
Sbjct: 39 RRAAAGDRRPAARAPNPSLSPRGGGGAP 66
>12_02_0046 + 12830974-12832386
Length = 470
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/79 (26%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Frame = +3
Query: 705 AXPRRAP*-TXQGVXPXXXPSXRXPGPXPXRXXGSXPXFPPXGTRG--AXPXPPPXGIPX 875
A PR+ P T Q P P+ P P + P + A PPP +P
Sbjct: 258 APPRQVPVITQQQAPPLKRPAPPVPSPPCAKKIRGPVSASPAARQSCVAASAPPPWCVPP 317
Query: 876 XXXXXXPQXGVXXQTPPXP 932
P V PP P
Sbjct: 318 PPRPAPPSRRVMAPLPPYP 336
>10_08_0362 + 17211788-17212300,17213342-17213623,17214071-17214139
Length = 287
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 488 PXPGRAAXX-SGLPPPPXGXTVXHXXGGSRGXXPXPKGPXR 607
P PG A S LPPPP GS PK P +
Sbjct: 212 PPPGSAGKLRSPLPPPPNDPAAARMNSGSNAGIRAPKEPAK 252
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +3
Query: 747 PXXXPSXRXPGPXPXRXXGSXPXFPPXGTRGAXPXPPPXGIPXXXXXXXPQXGVXXQTPP 926
P P P P P P PP P P P +P P V TPP
Sbjct: 77 PPYTPPTPRPPPTPPYVPSPPPYVPPY-----IPPPTPPYVPPYIPPPTPPY-VPPPTPP 130
Query: 927 XPP 935
PP
Sbjct: 131 SPP 133
>01_06_1427 + 37296883-37297588,37298504-37298658,37300596-37300955
Length = 406
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 524 GDRSPQPRARGXGVSERGNGRAPXTXTAXPRGGG 423
G+ SP PR RG S G+ T +A GGG
Sbjct: 2 GNCSPSPRRRGRPTSPSGSPPLDRTPSAKAAGGG 35
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,481,065
Number of Sequences: 37544
Number of extensions: 439135
Number of successful extensions: 1722
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -