Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D14
         (875 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.99 
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   9.2  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   9.2  

>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 514 FLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMDPD-AYDQFLVWHWD 669
           F V L T    YS+   EW+PPA      + D++++  D      +F  W +D
Sbjct: 124 FEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYD 176


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 340 RAL*TKYLVNSVKLSTNTTPRPRMDSRL 423
           RAL T+    ++++ T    RPR+D RL
Sbjct: 691 RALVTRRGDLTIEIGTGAAARPRVDERL 718


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 340 RAL*TKYLVNSVKLSTNTTPRPRMDSRL 423
           RAL T+    ++++ T    RPR+D RL
Sbjct: 735 RALVTRRGDLTIEIGTGAAARPRVDERL 762


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 882,832
Number of Sequences: 2352
Number of extensions: 18718
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)