Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D13
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 132 1e-30
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 132 1e-30
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 132 1e-30
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 132 1e-30
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 132 1e-30
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 132 1e-30
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 132 1e-30
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 132 1e-30
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 118 2e-26
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 33 1.0
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 132 bits (320), Expect = 1e-30
Identities = 68/136 (50%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = -2
Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
MG M PGK VLVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEX 211
I K S I FVKV YNHL PTR +V +K +DPA + V+FE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 210 XYXSGXXXWFFXKXRF 163
Y +G WFF K RF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 132 bits (320), Expect = 1e-30
Identities = 68/136 (50%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = -2
Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
MG M PGK VLVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEX 211
I K S I FVKV YNHL PTR +V +K +DPA + V+FE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 210 XYXSGXXXWFFXKXRF 163
Y +G WFF K RF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 132 bits (320), Expect = 1e-30
Identities = 68/136 (50%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = -2
Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
MG M PGK VLVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEX 211
I K S I FVKV YNHL PTR +V +K +DPA + V+FE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 210 XYXSGXXXWFFXKXRF 163
Y +G WFF K RF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 132 bits (320), Expect = 1e-30
Identities = 68/136 (50%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = -2
Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
MG M PGK VLVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEX 211
I K S I FVKV YNHL PTR +V +K +DPA + V+FE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 210 XYXSGXXXWFFXKXRF 163
Y +G WFF K RF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 132 bits (320), Expect = 1e-30
Identities = 68/136 (50%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = -2
Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
MG M PGK VLVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEX 211
I K S I FVKV YNHL PTR +V +K +DPA + V+FE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 210 XYXSGXXXWFFXKXRF 163
Y +G WFF K RF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 132 bits (320), Expect = 1e-30
Identities = 68/136 (50%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = -2
Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
MG M PGK VLVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEX 211
I K S I FVKV YNHL PTR +V +K +DPA + V+FE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 210 XYXSGXXXWFFXKXRF 163
Y +G WFF K RF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 132 bits (320), Expect = 1e-30
Identities = 68/136 (50%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = -2
Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
MG M PGK VLVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEX 211
I K S I FVKV YNHL PTR +V +K +DPA + V+FE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 210 XYXSGXXXWFFXKXRF 163
Y +G WFF K RF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 132 bits (320), Expect = 1e-30
Identities = 68/136 (50%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = -2
Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
MG M PGK VLVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEX 211
I K S I FVKV YNHL PTR +V +K +DPA + V+FE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 210 XYXSGXXXWFFXKXRF 163
Y +G WFF K RF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 118 bits (285), Expect = 2e-26
Identities = 61/125 (48%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = -2
Query: 531 LVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKNXIXKXSXIXPF 352
LVL+GRY G KA + KN D+GTSD+P A VAG DRYPRK MGK I K S I F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
Query: 351 VKVVXYNHLXPTRXTVXFSFEK--FXXKXLKDPAKXKXXXXXXXVRFEXXYXSGXXXWFF 178
VKV YNHL PTR +V +K +DPA + V+FE Y +G WFF
Sbjct: 76 VKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFF 135
Query: 177 XKXRF 163
K RF
Sbjct: 136 QKLRF 140
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 267 KDPAKXKXXXXXXXVRFEXXYXSGXXXWFFXKXRF 163
+DPA + V+FE Y +G WFF K RF
Sbjct: 6 RDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,347,981
Number of Sequences: 237096
Number of extensions: 938831
Number of successful extensions: 928
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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