Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D13
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p pro...   145   8e-35
AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA...   145   8e-35

>AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p
           protein.
          Length = 135

 Score =  145 bits (351), Expect = 8e-35
 Identities = 72/135 (53%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
 Frame = -2

Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
           M  IM  GK V+VLSGRY G KA + K +D+GT +KP G A VAG DRYPRK  K MGKN
Sbjct: 1   MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60

Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTV-XFSFEKFXXKXLKDPAKXKXXXXXXXVRFEXX 208
            + K S + PF+K + YNHL PTR T    SFEK   K LKDP K K       V+FE  
Sbjct: 61  KLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFESV 120

Query: 207 YXSGXXXWFFXKXRF 163
           Y  G   WFF K RF
Sbjct: 121 YKEGKNKWFFQKLRF 135


>AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA
           protein.
          Length = 135

 Score =  145 bits (351), Expect = 8e-35
 Identities = 72/135 (53%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
 Frame = -2

Query: 564 MGXIMXPGKXVLVLSGRYPGCKAXVXKNYDEGTSDKPXGXAFVAGXDRYPRKXHKXMGKN 385
           M  IM  GK V+VLSGRY G KA + K +D+GT +KP G A VAG DRYPRK  K MGKN
Sbjct: 1   MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60

Query: 384 XIXKXSXIXPFVKVVXYNHLXPTRXTV-XFSFEKFXXKXLKDPAKXKXXXXXXXVRFEXX 208
            + K S + PF+K + YNHL PTR T    SFEK   K LKDP K K       V+FE  
Sbjct: 61  KLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFESV 120

Query: 207 YXSGXXXWFFXKXRF 163
           Y  G   WFF K RF
Sbjct: 121 YKEGKNKWFFQKLRF 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,606,642
Number of Sequences: 53049
Number of extensions: 253379
Number of successful extensions: 237
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)