Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D12
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.051
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.051
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.051
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.27
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.27
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.27
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 33 0.36
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 33 0.36
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 33 0.36
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 32 0.63
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 32 0.63
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 7.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.051
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP P GG PP GG P PP F PP P P
Sbjct: 743 PPPPPPGGLPPIS--GGPPPPPPPPGGC---PPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP P GG PP GG P G PP P P P
Sbjct: 727 PPPPPPGGLP---PITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +1
Query: 529 PPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPP P GG PP GG P G PP PP P
Sbjct: 713 PPPPPGLPPIT----GGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGP 758
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -2
Query: 641 GGXPXFXGXKKXPPX--GGXXPXPPPXXP 561
GG P G PP GG P PPP P
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.051
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP P GG PP GG P PP F PP P P
Sbjct: 743 PPPPPPGGLPPIS--GGPPPPPPPPGGC---PPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP P GG PP GG P G PP P P P
Sbjct: 727 PPPPPPGGLP---PITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +1
Query: 529 PPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPP P GG PP GG P G PP PP P
Sbjct: 713 PPPPPGLPPIT----GGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGP 758
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -2
Query: 641 GGXPXFXGXKKXPPX--GGXXPXPPPXXP 561
GG P G PP GG P PPP P
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.051
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP P GG PP GG P PP F PP P P
Sbjct: 326 PPPPPPGGLPPIS--GGPPPPPPPPGGC---PPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP P GG PP GG P G PP P P P
Sbjct: 310 PPPPPPGGLP---PITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPP 357
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +1
Query: 529 PPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPP P GG PP GG P G PP PP P
Sbjct: 296 PPPPPGLPPIT----GGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGP 341
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -2
Query: 641 GGXPXFXGXKKXPPX--GGXXPXPPPXXP 561
GG P G PP GG P PPP P
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 532 PPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPP 642
PPPP P G GGG G PP P G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPL--IPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 532 PPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPP 642
PPPP P G GGG G PP P G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPL--IPTRPGPGGPPP 824
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPP 669
PPPPPP +P G G PP G P PP S PP
Sbjct: 238 PPPPPPKGSPPLA--GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPP 642
PPPPPP +P G PP G P G PP
Sbjct: 298 PPPPPPRGSPPTG------SLPPPQAGGSPPPAGTGSPP 330
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXG----GXFFXPXXXGXPPKKXFSKXPP 669
PPPPP +P G PP G G P G PP PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPP 669
PPPPPP +P G G PP G P PP S PP
Sbjct: 259 PPPPPPKGSPPLA--GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPP 642
PPPPPP +P G PP G P G PP
Sbjct: 319 PPPPPPRGSPPTG------SLPPPQAGGSPPPAGTGSPP 351
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXG----GXFFXPXXXGXPPKKXFSKXPP 669
PPPPP +P G PP G G P G PP PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPP 669
PPPPPP +P G G PP G P PP S PP
Sbjct: 244 PPPPPPKGSPPLA--GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPP 642
PPPPPP +P G PP G P G PP
Sbjct: 304 PPPPPPRGSPPTG------SLPPPQAGGSPPPAGTGSPP 336
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXG----GXFFXPXXXGXPPKKXFSKXPP 669
PPPPP +P G PP G G P G PP PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 532 PPPPXKNPXXGXXGGGXGFXPP 597
PPPP P G GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +1
Query: 529 PPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PP PP ++ G G PP P G PPK K PP P P
Sbjct: 115 PPGPPGRDGRPGAPGRPGNPGPPGRDGALLP---GPPPKPPCQKCPPGPPGP 163
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 532 PPPPXKNPXXGXXGGGXGFXPP 597
PPPP P G GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGG 606
PPPPPP P GGG G+ P GG
Sbjct: 63 PPPPPPPPAP----IGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGG 606
PPPPPP P GGG G+ P GG
Sbjct: 63 PPPPPPPPAP----IGGGAGYAAPFGG 85
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPP 642
PPPPPP G G PP F P G PP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP G G G PP G + PP + S P P P
Sbjct: 317 PPPPPP---SRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPP 642
PPPPPP G G PP F P G PP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP G G G PP G + PP + S P P P
Sbjct: 327 PPPPPP---SRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 529 PPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PP PP G G G+ PP G P PP + PP P P
Sbjct: 717 PPGPPGPQQHPGPYPGYPGYGPP--GAMRPPAGFAPPPGAPYG-YPPGAPPP 765
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGG 606
PPPPPP G GGG G GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGG 137
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXG 585
PPPPPP G GGG G
Sbjct: 54 PPPPPPACGGGCGGGGGGCG 73
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP P F PP P PP + PP P P
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSS-VPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPPKKXFSKXPPXXPXP 684
PPPPPP P F PP P PP + PP P P
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSS-VPPPPPPLPPISSGAPPPPPPPPP 816
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 342 FFXPXFXGGGAPXPXVFFXXGXPXPPXXGGG 250
F P GG P P F G P PP GG
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 639 GXPPXXGXKKXPPXGGGKXXPPP 571
G PP G + PP GG PPP
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPP 203
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 639 GXPPXXGXKKXPPXGGGKXXPPP 571
G PP G + PP GG PPP
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPP 483
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGG 606
PPPPPP P GGG GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGG 331
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 526 PPPPPPXKNPXXGXXGGGXGFXPPXGG 606
PPPPPP P GGG GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGG 331
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = +1
Query: 526 PPPP-----PPXKNPXXGXXGGGXGFXPPXGGXFFXPXXXGXPP 642
PPPP P P G GG G PP G + P G PP
Sbjct: 411 PPPPGGPGAPGSYGPPQGGPGG-FGPPPPGGPGAYGPPPTGFPP 453
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,826,783
Number of Sequences: 27780
Number of extensions: 155202
Number of successful extensions: 1516
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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