Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D10
         (884 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    31   0.035
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   4.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   4.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   7.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.4  

>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 235

 Score = 31.5 bits (68), Expect = 0.035
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
 Frame = +3

Query: 252 VYTIKVKTKPDTRNLYPSERRYSASTVSGLAWVHIALSATSFLLACLALVNPDEGKQPN- 428
           +Y    +  P   + YPS+    A     L+W H+ L A   L      +NP  GK+P+ 
Sbjct: 73  IYRYLCREFPTDGHWYPSDTVRQARVDEYLSWQHLNLRADVSLYFFHVWLNPLLGKEPDA 132

Query: 429 NTTESL-NSINGTAN---SSFVADNGYMLVLAPSLLSVFGLAAGVASIMASVKWY 581
             TE L   ++G  N      ++       LA   +S+  L+A      A +  Y
Sbjct: 133 GKTERLRRRLDGVLNFFDQELLSAGSGQAFLAGDRISIADLSAACEIEQAKIAGY 187


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 357 RCGPRPAPTP--WRRSSAAPTDTS 292
           RC P+ AP+P     SS +PT T+
Sbjct: 6   RCSPQSAPSPPHHHHSSQSPTSTT 29


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 357 RCGPRPAPTP--WRRSSAAPTDTS 292
           RC P+ AP+P     SS +PT T+
Sbjct: 6   RCSPQSAPSPPHHHHSSQSPTSTT 29


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = +2

Query: 497 HAGAGAELAQRVRPGGGRRQHHGFREVVHRPQHHLAIH 610
           +  A  E   ++      + HH    + H  QHH ++H
Sbjct: 102 NGNANREAGMKINLLNHHQHHHQHPHLPHVQQHHPSVH 139


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 548 RRQHHGFREVVHRPQHHLAIHSLGYVH 628
           + QHH   +  H+ QHH   HS G  H
Sbjct: 646 QHQHHQAHQ--HQGQHHAQHHSNGTHH 670


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,666
Number of Sequences: 2352
Number of extensions: 16814
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)